Pirellula sp. SH-Sr6A: VN12_09235
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Entry
VN12_09235 CDS
T04360
Name
(GenBank) Outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir01501
beta-Lactam resistance
pir01503
Cationic antimicrobial peptide (CAMP) resistance
pir02020
Two-component system
pir03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VN12_09235
09132 Signal transduction
02020 Two-component system
VN12_09235
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VN12_09235
01503 Cationic antimicrobial peptide (CAMP) resistance
VN12_09235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pir02000
]
VN12_09235
02044 Secretion system [BR:
pir02044
]
VN12_09235
01504 Antimicrobial resistance genes [BR:
pir01504
]
VN12_09235
Transporters [BR:
pir02000
]
Other transporters
Pores ion channels [TC:
1
]
VN12_09235
Secretion system [BR:
pir02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
VN12_09235
RTX toxin transporter
VN12_09235
Multiple protein transporter
VN12_09235
RaxAB-RaxC type I secretion system protein
VN12_09235
Antimicrobial resistance genes [BR:
pir01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
VN12_09235
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
VN12_09235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AMV32294
UniProt:
A0A142XZK7
LinkDB
All DBs
Position
complement(2218480..2220672)
Genome browser
AA seq
730 aa
AA seq
DB search
MKRNLTRWFVGMQIVSLMLTGCAPTQPFFIGERGDLSHYIDRAQQIEYPDLQNQSLPEVT
QSHPPLSLDNQNFDYKDLTLEECISIALMNTQVIRALPGTQRQNADIAAIILSSPSAQLS
TVYDPAIVANTTNSQPLVIDGSGNRVLARGAARANQVGGVEDALSEFDAQYSSFMSWGTT
DRARNVGAGNVFNPQFFQGRDGTAQMALSKRTATGGVATVRSQSIYSYNNIPTQSQGLGN
FGRAVPSDYTQVLEAQVQHPLLRGRGTMVNRVPVVLARINEDIAIADYEERIRNLVREVE
FAYWDLYAAYWNFATAKSARDSAALAYKIAAAKYNTGNAASQMAQASLTYHEFEAQVAAA
FSGGGVTNQPGLLGRELNLRLLMGWAATDGYLIRPIDKPATGMAQFDWDSIQGEMLQRNV
DLRKQKWVIKQKELELISSKNQILPDLNLNLIYRWVGVGGSLLNSNGGNPRFPGGGGNAS
AWEELLGGNYQEGVVRMDFTPNAIGARRQLADITKVQQDLARAHRILEDKELASSHLLTK
YIQQLKSVHEQMTQQFHSIVASDNLVDVWRAKFEIGDSSNQEYVIDQLLRAQQSRARAGQ
GYNTSVAEYNKILVEIHHLKGSLLEYNNIMLEEGMWAEKAYWDASERARERDAARHMSRG
ASRPAVISQGEFEQFQGTANDHARESKTASPLLQSPESDMEEPEQIPAVPERQAVPSDRK
AQRGNSLLRS
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaacctaacgcgatggtttgttggcatgcagatcgttagcttgatgctaacg
ggatgtgcacctacgcagccattcttcatcggcgaacgcggcgacttgtcccattacatt
gaccgcgcccagcagatcgaatatcccgatctccaaaatcagtcgctacccgaggtcact
cagtcgcatccgccgctgagcctcgacaatcagaactttgattacaaagatctgactctc
gaagagtgcatttcgattgcgttgatgaacacgcaagtcattcgtgcattgcctggaacc
cagcgacaaaacgccgacatcgctgccatcattctttcgagtccatccgcccagttaagc
acggtttacgatccggctatcgttgccaatacgaccaattcacaacctctcgtcatcgat
ggtagcggaaaccgagtcctcgctcgtggggccgctcgggctaaccaagtcggtggggta
gaagacgcattgagcgagtttgacgcgcagtacagctcgttcatgtcctggggcaccact
gatcgtgcgagaaacgtcggtgcaggcaatgtgttcaatccacagttcttccaaggtcgc
gacggtaccgcgcaaatggcgctgtccaagcgaacggcgaccggtggcgttgcgacggtt
cgttcgcaatccatctattcctacaacaacatcccgactcaatcgcaaggcctggggaac
ttcggtcgagctgtgcccagcgattacacgcaagttctcgaagcacaagttcagcatcct
ctcctaagaggtcgcggaactatggtcaaccgtgttcctgtcgtcttggctcgcatcaac
gaagatatcgcaattgccgattacgaagaacgcatccgaaacttggttcgcgaagtcgaa
ttcgcttactgggatctctatgcagcctattggaacttcgcaactgccaagagcgcacgg
gacagtgccgccctcgcgtacaagattgcggcagcaaaatacaacaccggaaacgctgca
agccaaatggcgcaggccagtttgacctatcacgagtttgaggctcaagttgccgcggcc
ttcagcggtggcggagtgacgaaccaacccggattgctcggtcgagaactcaacctccga
ttgctgatgggctgggcggctacggacggctatctcattcgaccgatcgacaagcccgca
actggaatggctcagttcgattgggattcgatccaaggtgagatgctccaacgaaacgtc
gacctgcgaaagcagaagtgggtgatcaagcaaaaggaattggaactcatttcgtccaag
aaccaaatccttcctgacttgaatctgaatctcatctaccgatgggtgggcgtgggtgga
tcgttgctcaacagcaacggtggcaatcctcgattcccagggggtggtggaaacgcgagt
gcttgggaagaactgctcggcggcaactatcaagagggagtggttcgcatggacttcacc
cccaacgccatcggtgcacgccgccagttggcggacatcacgaaagtacagcaagacctt
gcccgggctcaccgaatcctggaagacaaagaactcgcgtcttcgcacttgctgaccaaa
tacattcaacagctcaagagcgtgcacgagcaaatgacacaacagtttcacagcatcgtc
gccagcgataatctcgtcgacgtctggagagccaaatttgaaatcggagattcgagcaat
caggagtacgtcatcgaccagttgttgcgagcccagcaaagccgagctcgtgcgggtcaa
ggttacaacacttcggtcgcggaatacaacaagatcctggtcgagatccatcacctcaaa
ggctcgttgctggaatacaacaacattatgctcgaggaaggcatgtgggcagagaaagcc
tactgggatgccagcgagcgagctcgcgaacgagatgcagcacgccacatgagccgtgga
gcgagccgacctgccgtcatcagccaaggggagttcgagcagttccaagggacagcgaac
gatcatgctcgcgaatcgaagactgcttccccgctgctccaaagcccagaatcggacatg
gaagagcccgaacaaatccccgccgtaccggaacggcaggcggtaccgtccgaccggaaa
gcgcagcgaggcaactccctcctgcgatcctaa
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