Polynucleobacter ibericus: AOC20_06885
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Entry
AOC20_06885 CDS
T09789
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
piu
Polynucleobacter ibericus
Pathway
piu01501
beta-Lactam resistance
piu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AOC20_06885
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AOC20_06885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
piu02000
]
AOC20_06885
01504 Antimicrobial resistance genes [BR:
piu01504
]
AOC20_06885
Transporters [BR:
piu02000
]
Other transporters
Pores ion channels [TC:
1
]
AOC20_06885
Antimicrobial resistance genes [BR:
piu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AOC20_06885
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
AOC20_06885
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
AOC20_06885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QWE08147
LinkDB
All DBs
Position
complement(1356217..1357680)
Genome browser
AA seq
487 aa
AA seq
DB search
MRLKIMGTIAACLVLDGCALAPKPTQDEIIKNALPADTKIPSVWKSSESQQFPKGFVAND
WLKSLNDPTLEAIVLEAIKYNPDLVIAAERVRVAQQSVVVVGAALLPSIGAVGGGRTITS
EGVSGLSNSKMAYIGAAWEIDVWGRFRSERAAASEAFEATAMEYANARQSLAATVARAWY
TAIEAHRLVLLSQQRVKIYGDLLNLVEVRVKAGKDTELDLMVMRANVDSAQAALDAAEDA
YSQIRRSLELLLGRYPAAEIAVAKEFPELTPLPNTGAPAELLNRRPDVIAAEKRVLASFR
RSQATKLALLPSFRLTFLGGDIADPALALLKLNPWLATGALGAFLPIYEGGALRAQIEIA
SAQQSTEVARYGSAVLKAFSEVEGALYNEQYLMKRVSSTRKAALNRATAVDIATIQYKVG
KRDLLWVANLQNAQLTTDSELIRDNALLRLNRIALLSSLGGGYDSNPSIDVSSLEFLLDG
DSKPLSQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttaaagatcatgggcactattgctgcctgcctagtgcttgatggttgtgccctt
gcgccaaagccaacccaagatgaaatcattaaaaatgcattacctgccgatacaaaaatt
ccaagcgtttggaagtcttctgaaagccaacaattccctaaaggatttgtggcaaatgat
tggctgaagtctctgaatgaccctacgttagaggccatagtactcgaagcaattaaatac
aaccctgatttagttattgctgcagagcgagtcagagtagcccagcaaagtgtagttgta
gtgggtgcggccttattaccaagtattggtgctgtgggtggaggcagaactattacaagc
gagggcgtgagtggcctatcaaattcaaaaatggcctatattggtgcggcctgggaaatt
gatgtttggggcaggtttcggtctgagcgggcggcagcttctgaagcatttgaagctact
gcaatggagtatgcaaatgcccgccaatctttggctgcgacagttgctagagcgtggtac
acagcaattgaagcacatcgcctcgtgctactttctcagcagagggtcaaaatttacggc
gatttactcaacttagtagaggttcgggttaaagctggaaaagatacagaattagatttg
atggtgatgagggcaaatgttgactccgcacaagctgctttagatgcagcagaagatgcc
tactctcaaattcgtcgatcattagagttgctacttggaaggtatcctgccgctgaaatt
gcagttgccaaggaatttcctgagttaacgcccctacccaatactggcgctcctgcggaa
ctattgaatcgacgcccagacgtcattgccgcagaaaaaagggttctagcctcatttaga
cggtctcaagctaccaagttggcgcttttaccttcattccgcttaacttttttgggtggc
gatatagcggatccagcactcgcattattgaaattaaatccttggttggcaacaggagca
ttaggtgctttcttgccaatttatgagggtggtgcactaagagcgcaaatcgaaattgcc
tccgcccaacaatcaacagaagtagcccgctacggaagtgctgttcttaaagcatttagc
gaagttgagggcgcactttataacgaacaatacctcatgaaaagggtatcaagtacgcgt
aaagctgctttaaatcgtgctactgccgtcgatattgccaccattcagtacaaggttggt
aagcgtgatcttttatgggttgcgaaccttcaaaatgcccaacttacaactgattcagag
ctcattagggataacgcactactgcgtttaaatcggattgccttgttaagttcgttagga
ggtgggtacgattcaaatccatcaatagacgtttcttcattagagtttctcttggatggc
gattcaaagccactttcacaataa
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