Pseudomonas inefficax: RIN61_09345
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Entry
RIN61_09345 CDS
T09811
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
pix
Pseudomonas inefficax
Pathway
pix01501
beta-Lactam resistance
pix01503
Cationic antimicrobial peptide (CAMP) resistance
pix02020
Two-component system
pix03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RIN61_09345
09132 Signal transduction
02020 Two-component system
RIN61_09345
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RIN61_09345
01503 Cationic antimicrobial peptide (CAMP) resistance
RIN61_09345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pix02000
]
RIN61_09345
02044 Secretion system [BR:
pix02044
]
RIN61_09345
01504 Antimicrobial resistance genes [BR:
pix01504
]
RIN61_09345
Transporters [BR:
pix02000
]
Other transporters
Pores ion channels [TC:
1
]
RIN61_09345
Secretion system [BR:
pix02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RIN61_09345
RTX toxin transporter
RIN61_09345
Multiple protein transporter
RIN61_09345
RaxAB-RaxC type I secretion system protein
RIN61_09345
Antimicrobial resistance genes [BR:
pix01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
RIN61_09345
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
RIN61_09345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WNN41489
LinkDB
All DBs
Position
2075542..2076978
Genome browser
AA seq
478 aa
AA seq
DB search
MLRKLSLAIAVSCASNGMVWAADVPQTVKTDLVSVYQEAVDNNADLAAARADYGARREVV
PQARAGLLPNLSAGAEMLNTRTKLDEPSATSNRSGNTWSATLAQPIFRADRWFQLQAAEA
VNEQAALELSATEQNLILQTAQNYFAVLRAQDNLAATKAEEAAFKRQLDQSNERFDVGLS
DKTDVLQSQASYDTARANRIIAERQVQDAFEALVTLTNREYTSIQGVVHTLPVQVPTPND
AKAWVETAGRQNLNLLATNHAVVAAEETLRQRKAGHAPTLDAVAKYQKGDNDNFGFTNPA
PAPVTRYGGDVEQTSIGLQLNIPIYSGGLTSSQVREAYQRLSQSEQQRESLRRQVVENTR
NLHRAVNTDVEQVQARKQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYTSVRDYNN
SRYDYILDNLSLKQAAGTLSPQDLEDLKRYLKPDYNPDKDFLPPDLAAAAAKNFERRP
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcaaactttcactggcgatagccgtgtcttgtgcgtccaacggaatggtctgg
gcagcggacgtgccccaaacagtcaagaccgacctggtcagcgtctaccaggaagcggtc
gacaataacgctgacctggctgcggcccgcgccgattacggcgcacgccgcgaagtggtg
ccacaggctcgcgccgggttgctgcctaacctgtcggccggtgccgagatgctgaacacc
cgcaccaagctggacgaaccatcggccaccagcaaccgcagcggcaatacctggagcgct
accctggcgcaacctatcttccgcgccgaccgctggttccagttgcaggcggccgaagcg
gtcaacgaacaggcggcgctggagctgtcggcgaccgaacagaacctgatcctgcaaacc
gcgcagaattacttcgccgtgctccgcgcccaggacaacctggcggcgaccaaggccgag
gaagctgccttcaagcgccaactggaccagtccaacgaacgcttcgacgtcggcctatcc
gacaagaccgatgtgctgcaatcccaggcaagctacgacacggcgcgggccaaccggatc
attgccgagcgccaggtacaggatgccttcgaggccctggtaaccctgaccaaccgggaa
tacacgtcgattcagggcgtggtccacaccctgccggtgcaggtccctacgcccaacgac
gccaaggcctgggtcgaaaccgccgggcgccagaacctcaacctgctggccaccaaccat
gcggtggtcgctgccgaggaaaccttgcgccagcgcaaggccggccatgcgccgacactg
gacgcagtggccaagtatcagaagggtgacaacgacaacttcggtttcaccaaccccgca
ccggcccccgttacgcgctatggcggcgacgtcgagcagaccagcatcggcctgcagttg
aacatcccgatctacagcggcggcctgaccagctcgcaggtgcgcgaggcctaccagcgc
ctgagccagagcgaacagcagcgggaaagcctgcgccgccaggtggtggagaacacccgc
aacctgcaccgcgcggtgaacaccgatgtggaacaggtgcaggcgcgcaagcagtcgatc
atttccaaccagagcgcgctggaagccaccgagatcggttaccaggtgggtacccgcaat
atcgtcgatgtgctcgacgcccagcgtcagctgtacacctcggtgcgcgactacaacaac
agccgctatgactacatcctcgacaacctgagtctgaagcaggcggccggcaccttgagc
ccgcaggaccttgaggacctcaagcggtacctgaagccggactacaacccggacaaggac
ttcctgccgccggacctggcggctgcagcggccaagaacttcgagcgtcgcccctga
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