Pseudomonas inefficax: RIN61_23330
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Entry
RIN61_23330 CDS
T09811
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
pix
Pseudomonas inefficax
Pathway
pix01501
beta-Lactam resistance
pix01503
Cationic antimicrobial peptide (CAMP) resistance
pix02020
Two-component system
pix03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RIN61_23330
09132 Signal transduction
02020 Two-component system
RIN61_23330
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RIN61_23330
01503 Cationic antimicrobial peptide (CAMP) resistance
RIN61_23330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pix02000
]
RIN61_23330
02044 Secretion system [BR:
pix02044
]
RIN61_23330
01504 Antimicrobial resistance genes [BR:
pix01504
]
RIN61_23330
Transporters [BR:
pix02000
]
Other transporters
Pores ion channels [TC:
1
]
RIN61_23330
Secretion system [BR:
pix02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RIN61_23330
RTX toxin transporter
RIN61_23330
Multiple protein transporter
RIN61_23330
RaxAB-RaxC type I secretion system protein
RIN61_23330
Antimicrobial resistance genes [BR:
pix01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
RIN61_23330
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
RIN61_23330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WNN39091
LinkDB
All DBs
Position
complement(5168219..5169655)
Genome browser
AA seq
478 aa
AA seq
DB search
MLRKFSLAIAVSCASNGVVWAADVPQTVKTDLVSVYQEAVDNNADLAAARADYGARREVV
PQARAGLLPNLSAGAEMLNTRTKLDEPSATSNRSGNTWSATLAQPIFRADRWFQLQAAEA
VNEQAALELSATEQNLILQTAQNYFAVLRAQDNLAATKAEEAAFKRQLDQSNERFDVGLS
DKTDVLQSQASYDTARANRIIAERQVQDAFEALVTLTNREYTSIQGVVHTLPVQVPAPND
AKAWVETAGRQNLNLLATNHAVVAAEETLRQRKAGHAPTLDAVAKYQKGDNDNFGFTNPA
PAPVTRYGGDVEQTSIGLQLNIPIYSGGLTSSQVREAYQRLSQSEQQRESLRRQVVENTR
NLHRAVNTDVEQVQARKQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYTSVRDYNN
SRYDYILDNLSLKQAAGTLSPQDLQDLKRYLKPDYNPDKDFLPPDLAAAAQKNLERSR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcaaattctcactggcgatagccgtgtcttgtgcgtccaacggagtggtctgg
gcagcggacgtgccccaaacagtcaagaccgacctggtcagcgtctatcaggaagcggtc
gacaataacgctgacctggctgcggcccgcgccgattacggcgcccgccgcgaagtggtg
ccacaggctcgcgccgggttgctgcctaacctgtcggccggtgccgagatgctgaacacc
cgcaccaagctggacgaaccatcggccaccagcaaccgcagcggcaatacctggagcgct
accctggcgcaacctatcttccgcgccgaccgctggttccagttgcaggcggccgaagcg
gtcaacgaacaggcggcgctggagctgtcggcgaccgaacagaacctgatcctgcaaacc
gcgcagaattacttcgccgtgcttcgcgcccaggacaacctggctgcgaccaaggccgag
gaagctgccttcaagcgccaactggaccagtccaacgaacgcttcgacgttggcctgtcc
gacaagaccgatgtgctgcaatcccaggccagctacgacacggcgagggccaaccggatc
attgccgagcgccaagtacaggatgccttcgaggccctggtgaccctgaccaaccgggaa
tacacgtcgattcagggcgtggtccataccctgccggtgcaggtccctgcgcccaacgac
gccaaggcctgggtcgaaaccgccgggcgtcagaacctcaacctgctggccaccaaccat
gcggtggtcgctgccgaggaaaccctgcgccagcgcaaggccggccatgcgccgaccctg
gacgcagtcgccaagtatcagaagggtgacaacgacaacttcggtttcaccaaccccgca
ccggcccccgtcacgcgctatggcggcgacgtcgagcagaccagcatcggcctgcagttg
aacatcccgatctacagcggcggcctgaccagctcgcaggtgcgcgaggcctaccagcgc
ctgagccagagcgagcagcagcgggaaagcctgcgccgccaggtggtggaaaacacccgc
aacctgcaccgcgcggtgaacaccgatgtggaacaggtgcaggcgcgcaagcagtcgatt
atttccaaccagagcgcgctggaagccaccgagatcggctatcaggtgggtactcgcaat
atcgtcgacgtgctcgacgcccagcgccagctgtacacctcggtgcgcgactacaacaac
agccgctatgactacatcctcgacaacctgagcctgaagcaggcggccggcaccttgagc
ccgcaggacctgcaggacctcaagcggtacctgaagccggactacaacccggacaaggac
ttcctgccgccggatttggcggctgcagcgcagaagaatctcgagcgcagccgctga
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