Pseudomonas izuensis: LAB08_R21560
Help
Entry
LAB08_R21560 CDS
T08555
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
piz
Pseudomonas izuensis
Pathway
piz01501
beta-Lactam resistance
piz02024
Quorum sensing
Module
piz_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LAB08_R21560
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LAB08_R21560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
piz02000
]
LAB08_R21560
01504 Antimicrobial resistance genes [BR:
piz01504
]
LAB08_R21560
Transporters [BR:
piz02000
]
Other transporters
Pores ion channels [TC:
1
]
LAB08_R21560
Antimicrobial resistance genes [BR:
piz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LAB08_R21560
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LAB08_R21560
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LAB08_R21560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BCX67521
LinkDB
All DBs
Position
2392519..2393937
Genome browser
AA seq
472 aa
AA seq
DB search
MSFSTLAARSWRAAFRSPVSLTLLGVLMLGGCSMVPEYRQPELPLARQWDGATSSQSAQG
GQWWSEFHSAELDQLIARGLASNYTLKAAVSRIDEARASAQVAGAAQYPALNLGGNVQRQ
NNYGTTEKRSVFAEATYEIDFWGKQRAAADSADSLANATAFDAQTLRMSLGASIADSYFQ
VLSLEDRLRLARSIADDARQVLDLVEVQASQGAVSNLEVAQQRNAMQTFEAAIPPLRQQR
DLALYQLAVLVGAQPEGFHLQGDGLNALQVPQPATGLPIGLLRQRPDIQAAEARLKSANF
DVGVARAAFLPNLSLDLLGGIDTLAGGQIWSAIGTLSQPVFAGGQLKGQLHFDQAHVQEL
TSSYRESIIEALQDVETQLSAARELDKSYALNQSAVDSAREAARLAQVRYRLGSTDFQTL
LIVERTQYQAEDTLLQVRLQHLQAAVGLFRALGGDFSSDTLASNSPAQVAHP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttcaaccttggccgcgcgcagttggcgcgcggcatttcgctcacctgtgtca
ttgacgttgctcggcgtgctgatgctcggcggctgctccatggtgcccgagtatcggcaa
ccggagttgcccctggcccggcagtgggatggcgcgacgagcagccaatcggcccagggc
gggcaatggtggagtgaatttcacagcgccgaactggatcaactgatcgcccgtggcctg
gcgtccaactacaccctcaaggcggcggtcagtcggatcgatgaggcccgtgcatcggcg
caagtggcaggggcggcgcaatacccggcgttgaacctggggggcaatgtccagcgtcag
aacaactacggcaccacggaaaaacgcagtgtttttgccgaagcgacttacgagatcgac
ttctggggcaagcagcgtgccgccgccgactccgccgactcattggccaacgcgacggcg
tttgatgcccagaccttgcgcatgagtctgggggcgagcattgccgacagctacttccag
gtgctgtccctggaggaccggctgcgtctggcccgatccatcgccgacgatgcgcggcag
gtgttggatctggtggaagtccaggccagccagggcgcggtatcgaacctggaagtcgcc
cagcaacgcaacgccatgcagacctttgaagcggcgataccgccactgcgtcagcaacgg
gatctggcgttgtaccaattggccgttctggtcggcgcgcagcccgagggctttcacctg
caaggtgatgggctgaatgccctgcaagtgccgcaacctgcgaccgggttgccgattggc
ttgctgcgccaacggccggacatccaggccgccgaagcgcggctgaaatcagccaacttc
gatgtaggcgtggctcgcgccgcgtttctgcccaacctctcactggacttgctgggcggc
atcgacacgctcgctggcggccagatctggagcgccatcggcacgctcagccaaccggtg
tttgccggtggccagctcaaggggcagttgcacttcgatcaggcccacgttcaggagctg
acgtcgagttatcgcgaatcaatcattgaggccctgcaagatgtggagacgcaactcagc
gccgcccgcgagctcgacaagagctatgcgttgaaccagtccgccgtcgattcggcgcga
gaagcggcgcgcctggcgcaggttcgctaccgcctcgggtccaccgatttccagacgttg
ttgatcgtcgaacgcacccaataccaggccgaagacacgctgttgcaggtacgcctccag
catttgcaggccgccgtcggcctgttccgggccctgggtggggacttctcgtctgacacc
ctcgcttccaattctcccgctcaggttgcccacccatga
DBGET
integrated database retrieval system
