Pseudomonas izuensis: LAB08_R39680
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Entry
LAB08_R39680 CDS
T08555
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
piz
Pseudomonas izuensis
Pathway
piz01501
beta-Lactam resistance
piz02024
Quorum sensing
Module
piz_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LAB08_R39680
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LAB08_R39680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
piz02000
]
LAB08_R39680
01504 Antimicrobial resistance genes [BR:
piz01504
]
LAB08_R39680
Transporters [BR:
piz02000
]
Other transporters
Pores ion channels [TC:
1
]
LAB08_R39680
Antimicrobial resistance genes [BR:
piz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LAB08_R39680
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LAB08_R39680
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LAB08_R39680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DivIC
Motif
Other DBs
NCBI-ProteinID:
BCX69326
LinkDB
All DBs
Position
complement(4491308..4492777)
Genome browser
AA seq
489 aa
AA seq
DB search
MNSKTLRTGLSLVLLAMSLAGCANYSGLTTEGVSLDAKSLKAGQSLGDVKLSPAAWPKSD
WWKNLGDPQLDSLIHEALHDSPDMQIADARAHQASAAAYAADADRMPTLDASAGVSRSRL
ARDQDPSGQGDRYATLRNISTSFNYNFDLWGGQRDAWEAALGQARAAEVDRQAAQLTLSA
DVARAYSDLGQAHIVHDLSAEDLKRTRQMLDLSKRRLSAGIDSQYQFQQTESLEATSQAN
LIDAEKRLNSAKIALAVLLGKGPDRGNEIARPQILKASAVALPSVLPAELLGRRPDLVAA
RWRVEAASKNIDAGKTRFYPNLNLSAAAGAESLLGDAMFGSASRFFNIAPTLSVPIFDGG
RLRADLDSRDADYDLAVAQYNKSLVKALGDVSDSINQLRDIGRQIAAQQHATDIAQDSYN
TVVQRYGSGIGNYLDVLSIEQQLLQAQRQLANLNAEQIDLSIQLMQALGGGFQPEAMASA
NAAPATLTH
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtaagaccctgcgtactggcttgagcctggtgctgttggccatgagcctggcc
ggttgcgccaattacagtggcctgaccaccgaaggcgtcagcctcgatgcgaaaagcctc
aaggccgggcaatcccttggcgatgtgaagctgtcgccggcggcctggccgaaaagcgac
tggtggaaaaacctcggcgatccgcagctcgacagtctgatccacgaagccctgcacgac
agccccgacatgcagattgccgacgcccgtgcccatcaggccagcgccgctgcttacgcc
gccgatgccgatcggatgccgaccctcgatgccagcgccggcgtcagccgttcgcgcctg
gcccgggaccaggacccgagcgggcagggcgaccgctacgcgacgctgcgcaacatcagc
accagcttcaactacaacttcgacctctggggtggccagcgtgacgcctgggaagccgca
ttgggccaggcccgggctgccgaagtggatcgacaggccgcgcagttgaccctgtccgcc
gacgtcgcccgcgcctacagcgatctgggccaggcgcacatcgttcatgacctgtccgcc
gaagacctcaagcgcacccggcaaatgctcgacctgagcaagcgccgactgagcgccggg
atcgatagccagtaccagttccagcagaccgaaagcctggaagccacttcccaggccaat
ctgatcgacgccgagaaacgcctgaatagcgcgaagatcgccttggccgtactgctgggc
aagggcccggaccgcggcaatgaaatcgcccggccgcaaatcctcaaggccagcgccgtg
gcgttgccgtcggtgctgcccgccgagttgctcggccgtcgtccggatctggtggctgcg
cgctggcgggtcgaagcggcgagcaagaacatcgacgccggcaaaacccgcttctatccc
aacttgaacctcagtgccgccgccggtgccgaatctttgttgggcgatgcgatgttcggt
tcggcgagccgctttttcaacatcgcgccaaccctttccgtgccgattttcgacggtggc
cgcctgcgcgccgacctcgattcccgcgacgccgactacgacctcgcggtggcgcagtac
aacaaaagcctggtgaaggcattgggggatgtcagcgacagcatcaaccaattgcgtgat
atcggccggcaaatcgctgcccagcagcacgccaccgacatcgcccaggattcttacaac
accgtggtccagcggtacggttccggcatcggtaactacctggacgtgctcagcatcgag
cagcaattgctccaggcccagcgtcagctggccaacctgaatgccgagcagatcgatctg
tcgatccaactgatgcaggcgctgggcggtggcttccagcctgaggccatggcctcggcc
aacgctgctccagccacgctgactcactaa
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