Planctomyces sp. SH-PL62: VT85_20570
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Entry
VT85_20570 CDS
T04401
Name
(GenBank) Outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh01501
beta-Lactam resistance
plh01503
Cationic antimicrobial peptide (CAMP) resistance
plh02020
Two-component system
plh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VT85_20570
09132 Signal transduction
02020 Two-component system
VT85_20570
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VT85_20570
01503 Cationic antimicrobial peptide (CAMP) resistance
VT85_20570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plh02000
]
VT85_20570
02044 Secretion system [BR:
plh02044
]
VT85_20570
01504 Antimicrobial resistance genes [BR:
plh01504
]
VT85_20570
Transporters [BR:
plh02000
]
Other transporters
Pores ion channels [TC:
1
]
VT85_20570
Secretion system [BR:
plh02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
VT85_20570
RTX toxin transporter
VT85_20570
Multiple protein transporter
VT85_20570
RaxAB-RaxC type I secretion system protein
VT85_20570
Antimicrobial resistance genes [BR:
plh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
VT85_20570
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
VT85_20570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AMV39838
UniProt:
A0A142YKT2
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All DBs
Position
5247115..5249523
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AA seq
802 aa
AA seq
DB search
MRLTLRRNRWTHMAVLAAWVGSSGCQRLPYIDQSKSVPHDNMGKMALEDKEVKQADFLSS
GAPLPIPKIAKPRTTNDPEADEIWPMTLQEAIRIGLDNSEVVRVIAFGAQGIPVGGFEPQ
PLNTGAGAGIASALGAGTLRSVYDPAIQETQIAQALSAFDTAFITNMTYGKSSQPFNNAI
QGGTFQLAGTRTPVISVQDTANFQIGLQKRTATGAQIGIVHNVNWLYQNSTFLVTPSAYT
TNLQLSLTQPLMGSAPMPGQQAGPPVGLEANRAPIVVARLNADAAVWAFKADVMAQVRSI
EQQYWALAQQHVQLWSAEKAVELAREIVNREQAELVVGKGTVADVAEAQQRLEQFNLDLV
TKTADVITTERQLRNILGLPPADNRRIIPVTPPTEARLEPDWDSSLAQMVTFQPDIVQQQ
LLVRIAELQLLITRNQLLPQLSLNVLYQFNGFGQNLDSAEAVMTGATIKALEPVIAAQQR
AAGVAGNPGFYNNFRTWQVGWSFQMPLGMRAPLASTRQAQYTLLRQRAYLQQVIHQTVHS
LSRFFLEVDANFKQFKTASRLRAAAAERLAAQRAYYEEGRITIDRFLDAVSQYAQAVALE
AQYKTTYNISIVALEEAKGTLLAYNNIAVAEGPNPRKAYVQARDIQEGHKQIPIPPDGPM
YPERVVGPATPDPVAPQPPPNLEPGDPLPAMPAPIGPLGPSPTPIPPYRPAGEAPILSQT
PAPRTDPAAIPAGGPPRRLRRRPRHRPRARRPRPKNSPSFPRPSTSRRSPDGGPTSRRGP
NERPTLPRSVGLSALIATTWKA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgactttacgaaggaaccgatggactcatatggccgtgctggcggcctgggtg
ggctcatccggttgccagagacttccctacatcgaccagtccaagtccgtcccccacgac
aacatggggaagatggccctggaggataaggaagtcaagcaggccgacttcctctccagc
ggcgcgccgctgcccatccccaagatcgccaagccacggacgacgaacgatcccgaggcc
gacgagatctggccgatgacgttgcaggaggcgatccggatcggcctcgacaactccgag
gtggtccgggtcatcgccttcggtgcgcagggcatcccggtcggcgggttcgagccccag
ccgttgaacacgggggccggcgcgggcatcgccagcgccctgggcgccgggacgctgcgg
tcggtctacgacccggccatccaggagacccagatcgcccaggccctgagcgccttcgac
acggcgttcatcaccaacatgacctacggcaagagctcccagccgttcaacaacgcgatc
cagggcggcacgttccagctcgccgggacgaggacgccggtcatctcggtgcaggacacg
gcgaacttccagatcggcctccagaagcggacggccaccggcgcccagatcggcatcgtc
cacaacgtcaactggctgtaccagaacagcacgttcctggtcacgccgtcggcgtacacg
acgaacctgcagctatccttgacccagcccctgatgggcagcgcgccgatgcccggccag
caggccggcccgccggtcggcctggaggccaaccgcgccccgatcgtcgtcgcccggctc
aacgccgacgcggccgtctgggcgttcaaggccgacgtcatggcccaggtccggtcgatc
gagcagcagtactgggccctggcccagcagcacgtccagctctggtcggccgagaaggcc
gtcgagctggcccgcgagatcgtcaaccgcgagcaggccgagctggtcgtcggcaagggg
accgtggccgacgtcgccgaggcccagcagcggctggagcagttcaacctcgacctggtc
accaagacggccgacgtcatcaccaccgagcggcagttgcggaatatcctggggctcccc
ccggccgacaaccgccggatcatcccggtcacgccgccgaccgaggcccgcctggagccc
gactgggattcgagcctggcccagatggtcaccttccagcccgacatcgtccagcagcag
ctcctggtgcggatcgccgagctccagctcctgatcacccgcaaccagctcctcccccag
ctcagcctgaacgtcctctaccagttcaacgggttcggacagaacctggactcggccgag
gcggtcatgacgggggccacgatcaaggccctggaaccggtgatcgccgcccagcagcgg
gccgccggcgtcgcggggaacccgggcttctacaacaacttccggacctggcaggtcggc
tggtcgttccagatgccgctcggcatgcgggccccgctggccagcacgcggcaggcccag
tacaccttgctccgccagcgggcctacctccagcaggtcatccaccagacggtccactcg
ctgagccggttcttcctggaagtcgacgccaacttcaagcagttcaagaccgcctcgcgg
ctccgggccgccgcggccgaacgcctcgccgcccagcgggcctattacgaggaaggccgg
atcaccatcgaccgcttcctcgacgccgtcagccagtacgcccaggccgtcgctctcgag
gcccagtacaagacgacctacaacatctcgatcgtcgccctggaagaagccaaggggacg
ctcctggcctacaacaacatcgcggtcgccgaagggcccaacccccgcaaggcgtacgtc
caggcccgcgacattcaggaaggccacaagcagatcccgatcccgccggacggcccgatg
taccccgagcgagtcgtgggccccgccacgcccgacccggtggcgccgcagccgccgccg
aacctcgagcccggcgacccgctccccgcgatgcccgccccgatcgggccgctgggaccc
tcgccgaccccgattcctccgtaccgaccggccggcgaggcccccatcctctcgcagacg
ccggccccccggaccgacccggccgccatcccggccggcgggcccccgcgacgtctccga
cgccggccccggcaccggccccgagcccggcgcccacgaccgaagaactccccgagcttc
ccgaggccgtcgacctcccgccgctcccctgacggcgggccgacaagccgacgcggaccc
aacgaaaggccgacgctcccccggagcgtcggcctttcggcgttgatcgcgactacatgg
aaggcgtag
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