KEGG   PATHWAY: plut02010
Entry
plut02010                   Pathway                                
Name
ABC transporters - Paenibacillus lutimineralis
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
plut02010  ABC transporters
plut02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Paenibacillus lutimineralis [GN:plut]
Gene
EI981_00765  [KO:K10112] [EC:7.5.2.-]
EI981_00895  [KO:K20461]
EI981_00900  [KO:K20460]
EI981_00905  [KO:K20459]
EI981_00960  [KO:K11072] [EC:7.6.2.11]
EI981_00965  [KO:K11071]
EI981_00970  [KO:K11070]
EI981_00975  [KO:K11069]
EI981_01025  [KO:K17319]
EI981_01030  [KO:K17320]
EI981_01035  [KO:K17318]
EI981_01145  [KO:K10117]
EI981_01150  [KO:K10118]
EI981_01155  [KO:K10119]
EI981_01400  [KO:K02010] [EC:7.2.2.7]
EI981_01405  [KO:K02011]
EI981_01410  [KO:K02012]
EI981_01890  [KO:K17319]
EI981_01895  [KO:K17320]
EI981_01900  [KO:K17318]
EI981_02040  [KO:K17318]
EI981_02045  [KO:K17320]
EI981_02050  [KO:K17319]
EI981_02275  [KO:K17319]
EI981_02280  [KO:K17320]
EI981_02285  [KO:K17318]
EI981_02490  [KO:K17318]
EI981_02495  [KO:K17320]
EI981_02500  [KO:K17319]
EI981_02555  [KO:K17318]
EI981_02560  [KO:K17319]
EI981_02735  [KO:K17318]
EI981_02740  [KO:K17319]
EI981_02745  [KO:K17320]
EI981_02775  [KO:K17319]
EI981_02780  [KO:K17320]
EI981_02785  [KO:K17318]
EI981_03055  [KO:K23163]
EI981_03060  cysT; sulfate ABC transporter permease subunit CysT [KO:K02046]
EI981_03065  cysW; sulfate ABC transporter permease subunit CysW [KO:K02047]
EI981_03150  [KO:K10117]
EI981_03155  [KO:K10118]
EI981_03160  [KO:K10119]
EI981_03170  [KO:K18887]
EI981_03175  [KO:K18888]
EI981_03265  [KO:K16786] [EC:7.-.-.-]
EI981_03270  [KO:K16787] [EC:7.-.-.-]
EI981_03275  [KO:K16785]
EI981_03565  [KO:K16785]
EI981_03925  [KO:K17244]
EI981_03930  [KO:K17245]
EI981_03935  [KO:K17246]
EI981_03965  [KO:K10117]
EI981_04455  [KO:K17319]
EI981_04460  [KO:K17320]
EI981_04465  [KO:K17318]
EI981_04840  [KO:K17319]
EI981_04845  [KO:K17320]
EI981_04850  [KO:K17318]
EI981_04940  [KO:K02071]
EI981_04945  [KO:K02072]
EI981_04960  [KO:K02073]
EI981_05290  [KO:K09813]
EI981_05295  [KO:K09814] [EC:7.6.2.-]
EI981_05500  [KO:K05815]
EI981_05505  [KO:K05814]
EI981_05510  [KO:K05813]
EI981_05780  [KO:K18887]
EI981_05785  [KO:K18888]
EI981_05800  [KO:K10232]
EI981_05805  [KO:K10233]
EI981_05810  [KO:K10234]
EI981_06365  [KO:K17319]
EI981_06370  [KO:K17320]
EI981_06375  [KO:K17318]
EI981_06390  [KO:K17318]
EI981_06475  [KO:K17319]
EI981_06480  [KO:K17320]
EI981_06485  [KO:K17318]
EI981_06550  [KO:K17319]
EI981_06555  [KO:K17320]
EI981_06560  [KO:K17318]
EI981_06825  [KO:K17319]
EI981_06830  [KO:K17320]
EI981_06845  [KO:K17318]
EI981_07240  [KO:K02012]
EI981_07245  [KO:K02011]
EI981_07250  [KO:K02010] [EC:7.2.2.7]
EI981_07255  [KO:K02012]
EI981_07285  [KO:K17319]
EI981_07290  [KO:K17320]
EI981_07295  [KO:K17318]
EI981_07485  [KO:K17318]
EI981_07495  [KO:K17319]
EI981_07500  [KO:K17320]
EI981_07845  [KO:K17319]
EI981_07850  [KO:K17320]
EI981_07855  [KO:K17318]
EI981_08525  [KO:K15580]
EI981_08530  [KO:K15581]
EI981_08535  [KO:K15582]
EI981_08540  [KO:K15583]
EI981_08545  [KO:K10823]
EI981_09685  [KO:K10117]
EI981_09690  [KO:K10118]
EI981_09695  [KO:K10119]
EI981_09745  [KO:K09815]
EI981_09750  [KO:K09817] [EC:7.2.2.20]
EI981_09755  [KO:K09816]
EI981_10755  [KO:K18889]
EI981_10760  [KO:K18890]
EI981_10790  [KO:K10439]
EI981_10795  mglB; galactose/glucose ABC transporter substrate-binding protein MglB [KO:K10540]
EI981_10800  [KO:K10542] [EC:7.5.2.11]
EI981_10805  mglC; galactose/methyl galactoside ABC transporter permease MglC [KO:K10541]
EI981_10895  [KO:K20461]
EI981_10900  [KO:K20460]
EI981_10905  [KO:K20459]
EI981_11535  [KO:K02041] [EC:7.3.2.2]
EI981_11575  [KO:K23059]
EI981_11580  [KO:K17077]
EI981_11585  [KO:K23060]
EI981_11965  [KO:K17318]
EI981_11970  [KO:K17319]
EI981_11975  [KO:K17320]
EI981_12005  [KO:K17319]
EI981_12010  [KO:K17320]
EI981_12015  [KO:K17318]
EI981_12065  [KO:K14698] [EC:7.-.-.-]
EI981_12070  [KO:K14699] [EC:7.-.-.-]
EI981_12205  [KO:K10036 K10037]
EI981_12210  [KO:K10038] [EC:7.4.2.1]
EI981_12250  [KO:K02010] [EC:7.2.2.7]
EI981_12255  [KO:K02012]
EI981_12260  [KO:K02011]
EI981_12400  [KO:K19341]
EI981_12405  [KO:K19340]
EI981_14325  [KO:K20490]
EI981_14330  [KO:K20491]
EI981_14335  [KO:K20492]
EI981_14615  [KO:K18888]
EI981_14620  [KO:K18887]
EI981_15030  lsa; Lsa family ABC-F type ribosomal protection protein [KO:K19350]
EI981_15045  modB; molybdate ABC transporter permease subunit [KO:K02018]
EI981_15050  modA; molybdate ABC transporter substrate-binding protein [KO:K02020]
EI981_15065  [KO:K15580]
EI981_15070  [KO:K15581]
EI981_15075  [KO:K15582]
EI981_15080  [KO:K15583]
EI981_15085  [KO:K10823]
EI981_15170  [KO:K10117]
EI981_15175  [KO:K10118]
EI981_15180  [KO:K10119]
EI981_15260  [KO:K11632]
EI981_15265  [KO:K11631]
EI981_15455  [KO:K10119]
EI981_15460  [KO:K10118]
EI981_15465  [KO:K10117]
EI981_16020  [KO:K16907] [EC:7.6.2.-]
EI981_16025  [KO:K16906]
EI981_16030  [KO:K16905]
EI981_16215  [KO:K17318]
EI981_16220  [KO:K17320]
EI981_16225  [KO:K17319]
EI981_16380  [KO:K10010] [EC:7.4.2.1]
EI981_16385  [KO:K10009]
EI981_16390  [KO:K02424]
EI981_16830  [KO:K10119]
EI981_16835  [KO:K10118]
EI981_16840  [KO:K10117]
EI981_16970  [KO:K18104] [EC:7.6.2.2]
EI981_17140  [KO:K18889]
EI981_17145  [KO:K18890]
EI981_18455  [KO:K02012]
EI981_18460  [KO:K02010] [EC:7.2.2.7]
EI981_18465  [KO:K02011]
EI981_19415  [KO:K17318]
EI981_19420  [KO:K17320]
EI981_19425  [KO:K17319]
EI981_19820  [KO:K02036] [EC:7.3.2.1]
EI981_19825  pstA; phosphate ABC transporter permease PstA [KO:K02038]
EI981_19830  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
EI981_19835  [KO:K02040]
EI981_19880  pstB; phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
EI981_21555  [KO:K17320]
EI981_21560  [KO:K17319]
EI981_21565  [KO:K17318]
EI981_21650  [KO:K02045] [EC:7.3.2.3]
EI981_21705  [KO:K17318]
EI981_21710  [KO:K17320]
EI981_21715  [KO:K17319]
EI981_22115  [KO:K17318]
EI981_22120  [KO:K17320]
EI981_22125  [KO:K17319]
EI981_22145  [KO:K02000] [EC:7.6.2.9]
EI981_22150  [KO:K02001]
EI981_22155  [KO:K02002]
EI981_22740  [KO:K17318]
EI981_22745  [KO:K17320]
EI981_22750  [KO:K17319]
EI981_22820  [KO:K15772]
EI981_22825  [KO:K15771]
EI981_22830  [KO:K15770]
EI981_22860  [KO:K17320]
EI981_22865  [KO:K17319]
EI981_22870  [KO:K17318]
EI981_23265  [KO:K17318]
EI981_23270  [KO:K17320]
EI981_23275  [KO:K17319]
EI981_23530  [KO:K16785]
EI981_23785  [KO:K10200]
EI981_23790  [KO:K10200]
EI981_23795  [KO:K10201]
EI981_23800  [KO:K10202]
EI981_23815  [KO:K02073]
EI981_23820  [KO:K02072]
EI981_23825  [KO:K02071]
EI981_23870  [KO:K11709]
EI981_23875  [KO:K11708]
EI981_23880  [KO:K11710] [EC:7.2.2.5]
EI981_23885  [KO:K11707]
EI981_24430  [KO:K23536]
EI981_24435  [KO:K23535]
EI981_24440  [KO:K23537]
EI981_24445  [KO:K07335]
EI981_24675  [KO:K10119]
EI981_24680  [KO:K10118]
EI981_24685  [KO:K10117]
EI981_24730  [KO:K17320]
EI981_24735  [KO:K17319]
EI981_24740  [KO:K17318]
EI981_24765  [KO:K17318]
EI981_24770  [KO:K17320]
EI981_24775  [KO:K17319]
EI981_24865  [KO:K15583]
EI981_24870  vga; Vga family ABC-F type ribosomal protection protein [KO:K19349]
EI981_24880  [KO:K10242]
EI981_24885  [KO:K10241]
EI981_24890  [KO:K10240]
EI981_25690  [KO:K10439]
EI981_25695  [KO:K10547]
EI981_25700  [KO:K10548] [EC:7.5.2.-]
EI981_25705  [KO:K10546]
EI981_25855  [KO:K09691] [EC:7.5.2.14]
EI981_25860  [KO:K09690]
EI981_25995  [KO:K09811]
EI981_26000  ftsE; cell division ATP-binding protein FtsE [KO:K09812]
EI981_26910  [KO:K10117]
EI981_26915  [KO:K10118]
EI981_26920  [KO:K10119]
EI981_26925  [KO:K18888]
EI981_26930  [KO:K18887]
EI981_26990  cydC; thiol reductant ABC exporter subunit CydC [KO:K16012]
EI981_26995  cydD; thiol reductant ABC exporter subunit CydD [KO:K16013]
EI981_27210  [KO:K17320]
EI981_27215  [KO:K17319]
EI981_27220  [KO:K17318]
EI981_27300  [KO:K02044]
EI981_27305  phnC; phosphonate ABC transporter ATP-binding protein [KO:K02041] [EC:7.3.2.2]
EI981_27310  phnE; phosphonate ABC transporter, permease protein PhnE [KO:K02042]
EI981_27315  phnE; phosphonate ABC transporter, permease protein PhnE [KO:K02042]
EI981_27345  [KO:K17318]
EI981_27350  [KO:K17320]
EI981_27355  [KO:K17319]
EI981_27485  [KO:K11631]
EI981_27490  [KO:K11632]
EI981_27535  [KO:K10117]
EI981_27540  [KO:K10118]
EI981_27545  [KO:K10119]
EI981_27630  [KO:K17318]
EI981_27635  [KO:K17320]
EI981_27640  [KO:K17319]
EI981_27725  [KO:K17318]
EI981_27730  [KO:K17320]
EI981_27735  [KO:K17319]
EI981_27805  pstA; phosphate ABC transporter permease PstA [KO:K02038]
EI981_27810  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
EI981_27815  [KO:K02040]
EI981_27840  [KO:K05815]
EI981_27845  [KO:K05814]
EI981_27850  [KO:K05813]
EI981_28360  [KO:K15771]
EI981_28365  [KO:K15770]
EI981_28625  [KO:K17318]
EI981_28630  [KO:K17320]
EI981_28635  [KO:K17319]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
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