Pseudoalteromonas marina: CPA52_02995
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Entry
CPA52_02995 CDS
T06578
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pmaa
Pseudoalteromonas marina
Pathway
pmaa01501
beta-Lactam resistance
pmaa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPA52_02995
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CPA52_02995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmaa02000
]
CPA52_02995
01504 Antimicrobial resistance genes [BR:
pmaa01504
]
CPA52_02995
Transporters [BR:
pmaa02000
]
Other transporters
Pores ion channels [TC:
1
]
CPA52_02995
Antimicrobial resistance genes [BR:
pmaa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CPA52_02995
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
CPA52_02995
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
CPA52_02995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PTHB1_hp
Motif
Other DBs
NCBI-ProteinID:
ATG57268
LinkDB
All DBs
Position
649262..650677
Genome browser
AA seq
471 aa
AA seq
DB search
MIWQYKPTLLALSVILLSGCASNINPQERQQAPSNVPKQWQQQAASSVLQVDDEWLTQLN
TPLLKKYVNQALKNNQQLLQTSYDVAITKQQLIASGADLWPSLDLSTRTSRSKDNRPVSY
NNASSVSLNLNYEVDLWGKLSDSKREANLSYLAQKARFEQAKQQLVSDVVQGWFDVVSAQ
QLLDLYKRRLENSKQNLDIIESGYRQGINEALDVYLARNELNNERSRIATQTASLSSAAR
LLERLLGEYPKGAISASNDLPVINTEIPLGIPSELITRKPALLASWYELLATDASLAYAH
KQRFPSLNLTASLSDSTDRVSDLFSPSSLAWSLLGSISAPIFEGGRLQANEEIARLNTQK
QEQQYLQTLYDAFGDVENAISQQQSLKAQYTSTLEAQKNALAAEQLSFEQYQSGLVTYTT
VLDAQDRSFDAQSSLIQIKNQLIANRINLHVALGGDFEKPSSDLKSNNDEN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatttggcaatacaagccaacgttattggcacttagtgtgattctgctcagtggctgt
gcgagtaatataaatccacaggagcgccaacaagcacccagtaatgttcctaagcagtgg
caacaacaagcagcaagttcagttttgcaagtggatgatgaatggttaacgcaactaaac
acgccattgctgaaaaaatatgttaaccaagcgcttaaaaacaatcagcaactattacaa
accagctacgatgttgccattactaagcagcaacttattgcgtcgggggcagacctttgg
cctagcttagatttatctacgcgtactagccgaagtaaagataatcggcctgttagttat
aataatgctagctccgtaagcttaaacttaaattatgaagttgacttatggggcaaactg
tcagattcaaaacgggaagctaatctttcatatttagctcaaaaagcgcgttttgaacag
gctaaacagcagcttgtttcggatgttgttcaaggatggtttgatgttgtgtctgcacag
cagctgcttgatttatataaacgccgtttagaaaattctaagcaaaacctcgatataatt
gaatcaggttaccgccaaggtataaacgaagcgctcgatgtttatttagcccgcaatgag
ctaaataacgaacgttcacgcatagctactcaaacagcgagtttatccagtgctgcaagg
ctactggagcgtttattaggcgagtacccaaaaggagcaatttctgcaagtaatgattta
ccggttattaacacagaaattccactgggaattccatctgaacttattacccgaaagcct
gcattacttgctagttggtacgaactattggcgaccgatgcgtcattggcttacgcacat
aaacagcgctttcctagtttaaatttaactgcaagcttaagtgatagcacagacagagtg
agtgatttattttctccttcaagccttgcatggtctttgctaggaagtatttcggcacct
atttttgaggggggacgtttacaagccaatgaagaaattgcacgcctaaatacgcaaaag
caagaacagcaatatttacaaaccttgtacgatgcatttggtgatgtagaaaacgcgatt
tcgcagcagcaatctttaaaggctcaatatacaagcacacttgaagcgcaaaaaaatgca
cttgctgccgagcagttatcgtttgagcaatatcaaagtggcttagtcacttacaccaca
gtattggatgcacaagatcgctcattcgatgcgcaaagttcattaatacaaattaagaat
caattaattgcaaatagaatcaacctacatgttgcccttggtggtgattttgaaaaacca
tcaagcgacctaaagagtaacaacgatgaaaactaa
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