KEGG   Parus major (Great Tit): 107204470
Entry
107204470         CDS       T04864                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X3
  KO
K02084  apoptotic protease-activating factor
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj04115  p53 signaling pathway
pmaj04210  Apoptosis
pmaj05164  Influenza A
pmaj05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    107204470 (APAF1)
   04115 p53 signaling pathway
    107204470 (APAF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    107204470 (APAF1)
   05168 Herpes simplex virus 1 infection
    107204470 (APAF1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz APAF1_C Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_Gbeta EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WHD_APAF1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd NB-ARC ANAPC4_WD40 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR19_1st CARD Beta-prop_TEP1_C Beta-prop_WDR41 Beta-prop_Vps41 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_HPS5 RMC1_N Beta-prop_NWD2_C PEP5_VPS11_N Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_VPS8 WD40_RFWD3 CARD_2 Beta-prop_NUP159_NUP214 WD40_like Ge1_WD40 Tricorn_2nd Beta-prop_DCAF4 Beta-prop_ACSF4 Beta-prop_RSE1_2nd Beta-prop_WDR11_2nd Beta-prop_DCAF12 Beta-prop_Nup120_160 AAA_16 WHD_Dark AAA_22 nSTAND6 DUF2415
Other DBs
NCBI-GeneID: 107204470
NCBI-ProteinID: XP_015483125
Ensembl: ENSPMJG00000012940
LinkDB
Position
1A:44274868..44317905
AA seq 1249 aa
MDVKSRNYLLMNRQALENDIKTSYIMDRMIADEVLTLQEEERVKQQNTRKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAVSSGNRKSSMDGMTSYVKTILCEGGVP
QRPVVFVTRPKLVDAIKKKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDPQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHESTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGIKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANCLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLDDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVLSQEDC
MYWYNFLAYHMAGAQMQQELHDLMFSLDWIKAKTELVGPAHLIHEYVEYSSILDQKDSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGTFYLEWINKRS
LKNLYRLVVRPHRDAVYHACFSKDRQRIASCGADKTLQVFKAESGERLLEINAHDDEILC
CAFSADGEFVATCSSDKKVKVWNSRTGQCRCVYEEHSEQVNCCQFNNKSGQYLLATCSSD
TYIKIWDLNKKYCRNTMIGHENSVNHCRFSPDDEYVASCSTDGTVKLWEARSGNELKSIE
IKDFFRNADEQSDDVEVLVKCCSWSRNGNMLLVVAKNKLLLFDINTCGLLTQVIVSHHST
IQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSD
DQTIRIWETKKVCKSSDAVLKSELDVVFYNGEVMILAIYNQKNLQLINGNTDNVIMQTAA
QESPISCCCLSEDLKFAAFGQENGTIKVLELSDGKVLKSWEAYRTSVQHCRFTPDCQTLI
SSAHDSVIQVWNWQLSECVFLRGHKEAIKDFRLLEDSKLLSWSFDGTVKVWNVTTGNPER
DFACHGGAVLSCAVSPDGSKFSSASADKTAKIWSFESSSALHELKGHEACVRCCTFSPNN
KLLATGDDKGEIRIWDVLTGALLHFCSPVTVDEGEPTHGGWVTDLSFSPDNKMLVSSGGY
LKWWNVTTGESLQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQKF
NT seq 3750 nt   +upstreamnt  +downstreamnt
atggatgtcaaaagtagaaactatttgctgatgaatcgtcaagcactggaaaatgacatc
aagacttcttatatcatggatcgtatgattgctgatgaagtgctaacattacaggaggag
gagagagtgaagcagcagaatacacggaaggagcgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatccttttataatgcactgctccatgaagggtac
agagatcttgctgcacttctccaggacggcatccctgctgtctcatctggtaacagaaag
agttcaatggatggaatgacttcttatgtgaagaccattctctgcgaagggggtgtgcca
cagagaccagttgtgtttgtcactcgaccaaagctcgtagatgctattaaaaagaaactg
tactgcttgggaagtgatccaggctgggtcacggtttatggaatggcaggctgtgggaag
actgttttgacagcagaagctttaagggatcctcagctcttggaagattactttccagga
ggagttcactggatctctgttgggaaacaggacaaagcagggctcctcataaaacttcag
aatctctgtagtagattggaacatgagtccactctttcacaaagaccaccacttaacatt
gaggaggctaaagatcgtcttcgtttgctgatgttacgcaaataccccaggtctcttttg
gtcctggatgacatttgggattcctgggtgttaaaagcattcgataatcaatgtcaggta
ctcatcacgagcagggacaggagtgtaacagatgctgtggctggcattaaatacgaggtt
catgtggaaagtgggctagcacatgagaaaggactggagattttatccctatttgtgaat
atgaaaatatcagagcttccagaacaagctaactgtcttgtaagagaatgcaaaggttct
cctcttgtgatatccttgataggtgcattactacgagacttccctagccgctgggaatac
tatctcaggcagctgcagaataagcagtttaaaagaataagaaaatcttcctcgtatgat
tacgaagcccttgatgaagcaatgtccataagtgttgagcaactggatgacaattacaaa
gactactataaagacctctctatcctcccaaaagatgttaaagtacctactaaggttctc
tgtattctttgggatatggaaactgaagaggttgaagatatactacaggaatttgttaac
aaatcactgttgttctgtgatcggaatgggaagtcattccattattatttacatgatctt
cagcttgactttctcacagagaagaatcgcaaccagcttcaggagctacataaaaacata
gtaaatcagtacaagaaatactacaagcttaatacacctgttctgtctcaagaggattgc
atgtattggtataacttcctagcatatcacatggcaggtgcccaaatgcaacaggagctc
catgatcttatgttttctttggattggattaaagctaaaacagaattggtagggcctgct
catctgattcatgaatatgtagaatatagttcaatcctggatcaaaaggatagcacagtg
cgtgagaatttccaggaatttctgtctttaaatgggcaccttcttggacggcagccgttt
cctgacatcattcagctgggtctttgccagccagagacgtcagaggtgtatcaacaggcc
aagctgcatgcccaaagggaaacaggaacattttatttagagtggataaataaaagatcc
ttgaaaaatctctaccgtctggttgttcgtccacacagagatgcagtttaccatgcctgc
ttttctaaggatagacaaagaatagcatcatgtggagctgataaaacacttcaggtgttt
aaagcagaaagtggagagagactcctggagataaatgcccacgatgatgaaatactctgt
tgcgctttttctgcagatggtgaatttgtagcaacttgttcgagtgataaaaaagtgaag
gtctggaattcaagaacaggccagtgtaggtgtgtatacgaagaacactccgagcaggtc
aactgctgccagttcaataacaaaagtggtcagtaccttctggccacctgctccagtgac
acttacatcaaaatttgggatttaaataaaaaatactgtagaaatacgatgataggtcat
gaaaattctgtcaatcactgcagattttcaccagatgatgaatatgttgctagctgctca
acagatggaacagtaaagctttgggaagcacgctcaggaaatgaactgaaaagtattgag
ataaaagatttcttcagaaatgcagatgagcaatcagatgatgtggaggttttagtaaaa
tgctgctcttggtccagaaatggtaacatgcttttggtggtagccaaaaacaagcttttg
ctttttgatatcaacacctgtggtttgttaactcaagtcattgtcagccatcacagcaca
atccaatactgtgacttctgtcctggggatgagttagtagcagttgctttgtctcactgc
tctgttgagctgtggaatattaagtctttatcaaaagtggcatattgcagaggacacatg
agctgggttcactgtgtgacattttcaccagatggatctttatttctgacttcatctgat
gaccagacaatacgtatctgggaaacaaagaaggtgtgcaaatcttctgatgctgtgctg
aaaagtgaactagatgttgtattttacaatggtgaagtgatgattttagccatctacaat
cagaagaatttacaacttatcaatggaaatacagacaatgttattatgcagacagcagcc
caagagtctcccatttcctgctgttgcttaagtgaagatcttaaatttgcagcttttggg
caggagaatggaacaataaaggtactggagttgtcagatgggaaagttctgaagtcctgg
gaggcctacaggacatcggtgcagcattgtcgatttacacctgattgtcagactctcatc
tcgagtgctcatgattcagttatacaggtatggaattggcagttgagtgagtgtgtgttt
ctaagagggcacaaggaagcaatcaaggatttcagacttctggaagattccaaacttctc
tcttggtcgttcgatggaaccgttaaggtttggaatgtcactactggaaatccagaaaga
gattttgcttgtcacggaggtgctgttctttcctgtgctgtttcacctgatggtagtaaa
ttttcatctgcttctgctgacaaaactgcaaagatatggagctttgaaagttcatctgct
cttcatgaactgaaaggccatgaagcctgtgtgcggtgctgtactttctctcctaataac
aaactgttggccactggagatgacaaaggagaaataaggatttgggatgttttaactggt
gcattacttcacttctgctccccagttactgtagatgaaggagaaccaacacatgggggt
tgggtaacagacctctccttttctcctgacaataaaatgcttgtgtcatctggaggctat
cttaagtggtggaatgtaactactggagaatccttacaaaccttctacacaaatggaaca
aacctcaagtcaatacatgtgtcccctaatttcaaagtatatgtgactgttgataatctt
ggtattctttatgtattacagaagttctga

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