Parus major (Great Tit): 107206012
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Entry
107206012 CDS
T04864
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04620
Toll-like receptor signaling pathway
pmaj04621
NOD-like receptor signaling pathway
pmaj04622
RIG-I-like receptor signaling pathway
pmaj05164
Influenza A
pmaj05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107206012 (TRAF3)
04621 NOD-like receptor signaling pathway
107206012 (TRAF3)
04622 RIG-I-like receptor signaling pathway
107206012 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
107206012 (TRAF3)
05168 Herpes simplex virus 1 infection
107206012 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
MPS2
zf-C3HC4_2
ATG16
Med28
CEP104_ZnF
FliJ
Sina_ZnF
Spc29
zf-RING_UBOX
KxDL
Tropomyosin
GAS
DUF1664
zf-RING_6
SPATA24
Crescentin
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
107206012
NCBI-ProteinID:
XP_015486742
Ensembl:
ENSPMJG00000017327
LinkDB
All DBs
Position
5:51643421..51712755
Genome browser
AA seq
567 aa
AA seq
DB search
MDTSKKSEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLRSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLRTDCQFEELPCPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagtcagaaccccctttatctgtagaaatggtacagcagagggcc
aatcctgaccgcagtccatcagcatccatctatgttccagagcaaggtggctacaaagag
aaatttgtgaatgccgtggaagataagtacaaatgtgaaaaatgtcacctcatcttatgc
aatcctaaacagactgaatgtggacacagattctgtgaaacctgcatgaatgccttgctg
aggtcttctagtccaaaatgtacagcgtgtcaagaaagcatagtaaaagataaggtattt
aaagataattgttgcaggagagaactacttgcccttcaaatatactgcagaaatgaaaac
aagggctgtaaggaacagctatctttgggtcaattactgatgcatttgagaactgattgt
cagtttgaagaactcccatgtcctcgtgctgattgcaaagaaaaaatactgagaaaagat
ctgccagaccatgtagagaagacctgcaaataccgggagacaacctgtaaatactgtaaa
agccaagtcccaatgattatgttgcagaaacatgaagatacagactgcccatgtgtcatg
gtttcatgtcctcataaatgtagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagagaaactgaaagaactggacaaagaaatccgtcccttccgg
cagaactgggaggaggctgacagcatgaagagcagtgtggaatccctccagaacagagtg
actgagctggaaagtgttgataaaactgcagggcaaggagctcggaatacaagcctgctg
gagacccagctgagcaggcatgatcagatgctgagcgttcacgacattcggctggctgac
atggacctccgcttccaggttctagaaactgcaagttacaacggagtgctgatttggaaa
atccgagattataaacggcggaagcaagaagcagtcatggggaagactctgtccttgtac
agccaacccttttatactggatactttggctacaagatgtgtgccagagtttacctgaac
ggagatggcatgggaaaggggacgcacttgtctctgttttttgtcataatgcgtggagaa
tacgacgctttgcttccttggcccttcaaacagaaagtgactctcatgctcatggatcag
ggaccgtctcgacgtcacttgggagatgctttcaagccagatccaaacagcagcagtttc
aagaagccaactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
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