Parus major (Great Tit): 107206215
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Entry
107206215 CDS
T04864
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107206215 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107206215 (KDM2A)
04121 Ubiquitin system [BR:
pmaj04121
]
107206215 (KDM2A)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107206215 (KDM2A)
Enzymes [BR:
pmaj01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
107206215 (KDM2A)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
107206215 (KDM2A)
Ubiquitin system [BR:
pmaj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107206215 (KDM2A)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
107206215 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
107206215 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
107206215
NCBI-ProteinID:
XP_015487321
Ensembl:
ENSPMJG00000007031
LinkDB
All DBs
Position
5:complement(7122086..7154550)
Genome browser
AA seq
1207 aa
AA seq
DB search
MAAAAPVRGQRRRRDLEEEDDDSSPGVSFSLSSEESEMEPEEERIRYSQRLRGTMRRRYE
DDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGKDFTVEYIQRGGLRDPLIFRNSDG
LGIKMPDPDFSVNDVRLCVGSRRMVDVMDVNTQRDIEMSMAQWARYYETPEEEREKLYNV
ISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
ECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMDMELSSSDSVNMEEEEEEEDDE
DAAGKESRRPTTRRSILTSPIANGANVDYDELSKSCRSSLPGLKKTPSIDSSDSSRGSQN
GQAWDPSGGSPRKSRKVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKL
LLEEYANSDPKLALTGVPIVQWPKRDKLKLQARLRVRLPTIPITKPHTMKPAPRPTPVRS
TVSPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLP
HSVTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPKC
YQGDDAEKGQKRKVEESDDDTAQAKVLRPLRSCEEPLTPPPNSPTPMLQLIHDPASPRGV
VTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKLH
GSYLTVTLQRPTKDVHGTSIVPKLQAITASSANLQHSPRVVVRHAPTRMPLRSGGDEEAA
AEEEEEEEEEEEENAEEGGAARLNGRGGRAQEGEESCVQREVWMSVFRYLTRRELCECMR
VCKTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNR
LPGLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSQDNR
SKLRNMIDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGSSTRNS
LTELNMAGCNKLTDQALLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDE
KLIQKIS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctcctgtaagaggacaaaggcgccggagagacctggaggaagaggac
gacgacagcagtcctggcgtgtccttctcactctcttcagaggagtcggagatggagcct
gaggaagaacggatccgttacagccaaagactgcgtggcacgatgaggcgacgttacgag
gatgatggcatctccgacgatgagattgaagggaagaggacgtttgaccttgaggaaaag
ctgtccaccaacaaattcaactccacttttgtggtcttcatggaaggcaaagacttcaca
gttgagtacatccagcgaggtggcctgagggacccactcatcttcaggaactcggatggc
ctggggataaagatgccggatccagacttcagcgtgaacgatgtgcggttgtgtgtgggg
agccgacggatggtggatgtgatggacgtgaacacgcagcgagacatcgagatgtccatg
gcgcagtgggcgcgctactacgaaacaccggaggaggagcgggagaagctctacaatgtc
atcagcctggagttcagccacaccaaactggagaatctggtgcagagacctgctacggtg
gatttgattgactgggttgataacatgtggcccaggcacctgaaggaaagtcagacagag
tctaccaatgccatcctggagatgcagtatccaaaggtgcagaaatactgtttgatgagc
gtcaagggctgctacacagatttccatgtggactttggtggcacttctgtgtggtaccac
atccaccgagggggaaagatcttctggctgatccctcccacaccccagaacctggagctc
tatgaaaactggcttctctcagggaagcagggagacatcttccttggggacagagtgtca
gagtgccagcgcatcgagcttaagcagggctacacatttgtcatcccctcaggttggatc
catgctgtgtacactcccatggacacgctggtttttgggggcaacttcttacacagcttc
aacatccctatgcagctccggatctacagcattgaggatcgcacacgggtcccaaataaa
tttcgttatcccttctattacgagatgtgttggtatgtgctggagcgctacgtgtactgc
atcaccagccgctcccacctgacaaaggacttccagaaggaatccctgagcatggatatg
gagctgagctcctcagactcggtgaacatggaagaggaggaggaagaggaggatgatgag
gatgcagcagggaaggaatcccggcgccccacgaccaggaggtccattctcaccagcccc
atcgccaatggtgccaatgtggactacgacgaactgagcaagagctgccggagcagcctg
ccaggtctcaagaagaccccatccatagactcttctgactccagccggggctcccaaaat
ggccaggcctgggacccgagtggtggcagcccccgcaagagcaggaaggtgcacctgacc
cagtttgagctggaggggctgcgctgcctcgtggacaagctggagtcgctccctctgcac
aagaagtgtgttcccaccggcatcgaggatgaggacgccctcatcgctgacgtcaagctg
ctgttggaagaatacgcaaacagcgatcccaaactggcacttacaggcgtccccatcgtc
cagtggcccaagagagataagctaaaactccaggcccggctgcgggtgcgcctgcccacc
atccccatcaccaagccgcacaccatgaagccagcaccacgcccgactcccgtcaggtcc
acggtgtctcccatcgtgtcgggcgcccggcggaggcgggtgcggtgtcggaaatgcaag
gcctgcatgcagggcgagtgtggcatgtgccactactgcagggacatgaagaagtttggc
gggcctggccgcatgaagcagtcttgtgtcctccggcagtgcttggcgcccaggctgcct
cactcagtcacgtgtgcactttgtggggaggtggatcagaatgaggactcgcaggacttt
gagaagaagctcatggagtgctgtatctgcaatgagatcgttcaccccggctgtctgcag
atggatggggaagggctgctcaatgacgagctccccaactgctgggagtgccctaagtgc
taccagggtgacgatgcagagaagggccagaagcgtaaggtggaggagagcgacgacgac
acggcgcaagccaaggtgctgcggcccctgcggagctgcgaggagcccctgacccccccg
cccaactcgcccaccccgatgctgcagctgatccacgaccccgcgtccccccgcggggtg
gtgacgcgctcatccccgggggccgggcccagcgaccaccacagcgccagccgggacgag
cgtttcaagcgccggcagctgctgcggctccaggccacggagagaaccatggtgcgggag
aaggagaacaaccccagtggcaagaaggagctgtcagaggtggagaaggccaagctgcac
ggttcctacctcaccgtgacgctccagcgccccaccaaagatgtccacggcacttcgatc
gtccccaagctccaagccatcacggcctcctcggccaacctgcagcactcaccgcgcgtg
gtcgtgcgccatgcgcccaccaggatgcccctgcggagcgggggcgacgaggaggcggct
gccgaggaagaggaggaggaagaggaggaggaggaggagaatgcggaggaggggggggcg
gcccggctgaatgggcgcgggggccgggcgcaggagggcgaggagagctgcgtccagcgc
gaggtctggatgtccgtgttccgctacctcacccgcagggagctctgcgagtgcatgcgg
gtgtgcaagacctggtacaagtggtgctgtgacaagagattgtggacaaagatagacctg
agcaggtgcaagtccatcaccccccaggcgctgagtggcataatcaaaaggcagccggtc
agcctcgacctcagctggaccaatatctcaaaaaaacagcttacgtggcttgtcaacagg
ctgccaggcctgaaagacctcatcctagcgggctgttcctggtctgcggtctgtgctctc
agtacctccagctgcccccttctcaggaccctcgatcttcggtgggcagtaggaatcaag
gaccctcagatccgggacttactcacacctccaacagacaaacccagtcaggacaatcgc
agcaaactccgcaacatgatcgacttccggctcgccgggctggacatcacggacgccacg
ctgcgcctgattatccgccatatgcccctgctctcccgcctcgacctcagccactgcaac
cacctcacggaccagtcggccaacctcctcaccgccgtgggctcctccacacgcaactcc
ctcaccgagctcaacatggcaggctgcaataagctgacggaccaggccttgctctacctg
cgccgcatctccaacgtcaccctcatcgacctgcggggttgcaagcagatcacccgcaaa
gcctgtgagcacttcatctcggacctgtccatcaacagcctctactgcctgtccgatgag
aagctgatccaaaaaatcagctag
DBGET
integrated database retrieval system
