Parus major (Great Tit): 107207018
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Entry
107207018 CDS
T04864
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1
KO
K10031
C-X-C motif chemokine 12
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04060
Cytokine-cytokine receptor interaction
pmaj04672
Intestinal immune network for IgA production
pmaj04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
107207018 (CXCL12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107207018 (CXCL12)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
107207018 (CXCL12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pmaj04052
]
107207018 (CXCL12)
00536 Glycosaminoglycan binding proteins [BR:
pmaj00536
]
107207018 (CXCL12)
Cytokines and neuropeptides [BR:
pmaj04052
]
Cytokines
Chemokines
107207018 (CXCL12)
Glycosaminoglycan binding proteins [BR:
pmaj00536
]
Heparan sulfate / Heparin
Chemokines
107207018 (CXCL12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
107207018
NCBI-ProteinID:
XP_015489098
Ensembl:
ENSPMJG00000016047
LinkDB
All DBs
Position
6:complement(14454342..14472537)
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AA seq
131 aa
AA seq
DB search
MDLRALALFAFALAVVSLSEEKPVSLTYRCPCRFYESNVARANIKHLKILSTPNCSLQIV
ARLKSNSKQVCIDPKLKWIQEYLEKALNKPRHRTHKKKQQKKRGPLCPSRATPLKSPGRK
NGGSRCKRQAL
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atggacctccgcgccctggcgctgttcgccttcgccctggccgtcgtctccctctcggag
gagaaacccgtcagcctgacttaccgatgtccctgtcgattctacgagagcaacgtggca
agagccaatattaaacacctcaaaatcctctccacacccaactgctcacttcagattgtt
gcaaggctcaagagcaacagcaagcaagtgtgcattgatcccaagttaaagtggatccag
gaatatctggagaaagctttaaacaaaccacgtcatcgcactcataaaaaaaagcaacag
aagaaacggggcccactctgcccttcccgtgcaacaccactaaagtctccagggagaaag
aatggaggttcaagatgtaagaggcaagcattgtaa
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