Parus major (Great Tit): 107208126
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Entry
107208126 CDS
T04864
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04514
Cell adhesion molecules
pmaj04520
Adherens junction
pmaj04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107208126 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107208126 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
107208126 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmaj01009
]
107208126 (PTPRF)
Enzymes [BR:
pmaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
107208126 (PTPRF)
Protein phosphatases and associated proteins [BR:
pmaj01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
107208126 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
Tc-R-P
PTP-SAK
DSPc
V-set
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Ig_C17orf99
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
107208126
NCBI-ProteinID:
XP_015491625
Ensembl:
ENSPMJG00000019500
LinkDB
All DBs
Position
8:20398884..20775792
Genome browser
AA seq
1922 aa
AA seq
DB search
MVPNFCIPVLTVPAAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSI
PPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANY
TCVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKP
KSLEGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSP
PLKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVG
SLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPAS
QERITKYELLYWEGEDGTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTV
EARTAQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKH
VVDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESVPVHVRTDEDVPSAPPRKVEV
ESVNSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDS
VDHETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTAL
IQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNR
AGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRD
INSQQDLVNITKDTSITLTNLKPDTTYDIKVRARTNKGAGPLSPSIQSRTMPVEQVFAKN
FRVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVL
MNRGSSAGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVV
PADQSTSTLTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFT
LGDEKNYKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPE
MLWVMGPVLAVILIIIIVIAILLFKSKQERKRAHSPSSKDEHSIGLKDSLLAHSSDPVEM
RRLNYQTPGASVPCCPNISSMRDHPPIPVTDLADNIERLKANDGLKFSQEYESIDPGQQF
TWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQG
PLPETLSDFWRMVWEQKTATIVMMTRLEEKSRVKCDQYWPSRGMETYGMIQVALVDTVEL
ATYTVRTFALYKNGSNEKTELRQFQFMAWPDHGVPEYPTPILTFLRRVKACNPTDAGPMV
VHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALL
EAATSGNTEVPARNLLAHIQKLSQVPPGESVTLMELEFKNLANSKAHTSRFISANLPCNK
FKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFIDGYRRQKAYIATQGPLAETTEDFWR
MLWEHDSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVT
DARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGR
TGVFITLSIVLERMRYEGVVDMFQMVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHY
AT
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcatcccagtactcactgtgccagcagccatcctctgctgcttg
atgctgcctttagcaggagcggacagcaagccaacgtttatgaaggctcctgaagatcag
attgggatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcccaagcct
cgtatcacgtggatgaagaaggggaagaaagtcagttctcagcggtttgaggttatcgag
tttgatgatggatcaggatcagttctgcggatacagcccctgcgtgttcatcgagatgaa
gctatctatgagtgcacagccaccaacagtgtgggggagataaacaccagtgccaagtta
acagtcttagaagaagaccacctccctgctggcttcccaaccattgacatgggcccacag
ctgaaggtggtggaaaaggcccgcacagccacgatgctctgtgctgccagtgggaaccct
gatcctgagatctcctggttcaaggacttcctgcccgtcgacactgcaaccagcaatggg
cgaatcaagcaactccgctcgggtggtacaccgatcagaggagctctgcaaatagagaac
agtgaggagtcagaccaaggcaaatatgagtgtgttgcaaccaacagcgcaggaacccgc
tactctgccccagccaacctttatgttcgagtgcggcgtgttgctcctcgattctctatc
cctccgagcaaccacgaggtgatgcctggggggagcgtgaacctcacgtgcgtggcagta
ggtgctccaatgccctacgtgaagtggatggctggtgtggaggaactgaccaaagaagat
gagatgcccgttggtaggaatgtcctggagctgaataacatcatgcagtctgccaactac
acctgtgtggccatctcttccctcggcatgatcgaagccacagcccagatcactgtcaaa
gcactgccaaaacctccaacagagccattagtgactgaaacgacagctaccagtgtgacc
ctcacctgggattcaggcaactctgaccccatttcatattatgtcatccagtacaaaccc
aaatccctggagggccagttccaggaggtggatggtgtggcaaccacccgctacagcata
ggtgggctcagccccttctcagagtacgagttccgggtcatcgcagtcaacaacatcggc
aggggtccccccagtgaactggtcgaggcccggacaggagaacaagctccttcaagtcca
cctctcaaagtccaggcacggatgctgagcgccagcaccatgctggtccagtgggagcag
ccggaggagcccaatggacagatccgagggtaccgcgtgtactacaccaccgacccacac
ctgcctctgagcatgtggcagaaacacaacactgatgacagccacctcaccaccgtgggc
agcctcatcacaggcaccacctacagcatccgcgtcctggccttcacttcggtgggcgac
gggcccccctcagacatcatccaggtcaaaacacagcagggggttcctgcccagccagct
gacttccaggcagaagcagagtctgatacccgcatcctgctgacatggctgcccgcctct
caggaacgcattactaaatatgagctgctgtactgggaaggggaggatggcactcagcaa
aaggtggagtttgacccaacctcctcatatgctgtggaaggtctcaaaccagacacattg
tataagttccgtctgggtgcccgctcggagctgggagtgggagtttacacccccacggtg
gaagccagaactgcccaatccaccccctccgccccaccccaagaagtcgagtgtgtaagc
accagctccaccaccatccgggtaagttgggtgccaccgcccgcccagagccgcaatggg
gtcatcacccagtactccattgcctaccaggcagtggaaggagatgacaacaccaagcat
gtggtggatggcattggacgggagcattccagctgggagatcaaggacctggagaaatgg
accgaatacaaggtgtgggtaagggctcacaccgatgtggggccaggaccggagagcgtc
cccgtgcacgtgcgcactgacgaggatgtgcccagcgccccaccgcgaaaggtggaggtg
gagtctgtgaattcgactgccatccgggtgagctggaagctgcccatctccaacaagcag
catgggcagatccgagggtatcaggttacctatgtgaagctggaaaacaacgagccccga
gggcagccagtgatcaaggacgtcatgctgtcagaagcacagtggagagctgaggactcc
gtcgaccatgagacagtcattggaggcctgctgccagaaaccacctactccgtcacagtt
gctgcctacaccaccaaaggagatggtgcccgcagcaagcccaaagtcatcaccaccaca
ggggcagtcccggggaagcccaccatgatgattagcacgacagccatgaacacagccctc
atccagtggcacccacccaaggagatggtaggggagctgctgggttaccggctgcagtac
agacgtctggatgaggaaaaaatgaacacgatagacttcgggaagagagaccatcactac
acagtgacaaacctgcacaagggggccacctacctcttcaaattgtctgccaagaacaga
gctggcccaggagaagagtttgagaaggagatcacaactgccgaagatgtgccaagcggc
ttcccacagaacctgcgtgtggtgggtctcaccacttccaccacagaagttgcttgggac
cccccggtcttggcagaaaggaacggcaagatcgtcaactacacagtggtttacagggac
ataaatagccagcaggacctggttaacatcaccaaggacacgagtatcactttgacaaat
ttgaaacctgataccacttacgacatcaaagtgagggcccgcaccaataagggggctggg
ccactcagccccagcatccagtcccggaccatgcctgtagagcaagtgtttgctaagaac
ttccgtgtcaatgccgtcatgaaaacgtctgtgttgctgagctgggaagtgcctgactcc
tataaatctgcagtgccttttaagattctgtacaatagccagagtgtggaggtggacggc
cactcgatgaagaaactcataagtgacctccagccagacactgactattcttttgtgcta
atgaaccgtgggagcagcgcaggggggctccagcacctcgtctcaatccgaactgctcct
gatgtcttgcaaagcaaacccatcgccacaaacaagtacatacaggaaggaaaattcacg
ctaactcttcccaaagtgcagaccactgtgccagttcggtggtactacatcgtggttgtg
ccagcagaccagagcaccagcaccctgactgctcggtggcggactccggatgagatggag
ctggaccagctgctggaggccataagccaggggagtcagagcaggcggcagcggcgccag
gcagacagactcaaaccctacattgctgctcaagtggatgtgctgcctgagaccttcacc
ctgggggatgagaagaactacaaaggtttctacaacaagcctctgtctcaagacctgagc
tatcgctgcttcgtgctggcctcgctggaggatggggacacgaagagatatgcagccagc
ccctactcagatgagatcgtgatggaagtggcatcagcaaagcagcaggatgaaccagag
atgctgtgggtgatgggacctgtcctggctgtgatattaatcatcatcattgtcattgcc
atacttctcttcaaaagtaagcaagaaaggaaaagggcacattccccttcctccaaggat
gagcattccatcggcctgaaggactcactcttggcccactcgtctgacccagttgagatg
aggcggctcaactaccagactccaggtgccagtgtcccctgttgcccgaatatctcaagc
atgcgtgaccacccccccatccccgtgaccgacctcgctgacaacatcgagcggctcaag
gccaacgatgggctgaagttctcccaggagtacgagtccattgatcctgggcagcagttc
acgtgggagaactccaacctggaagtgaataaaccgaaaaaccgctatgcaaacgtgata
gcctatgaccactcacgtgtcatcctgacttccattgatggagtcccaggcagtgattac
atcaatgccaattacattgatggatatcggaagcagaacgcctacatcgccacacaggga
ccgctgccagaaaccctcagtgacttttggaggatggtgtgggaacagaaaacagcaact
atagtcatgatgaccaggctggaggagaagtccagggtaaagtgtgaccagtactggccg
agccggggtatggaaacctacgggatgatccaggtggccctggtggatacagttgagctg
gcgacctacaccgttcgcacctttgcgctgtacaagaatggctccaatgagaagacagag
ctgcgacagttccagttcatggcttggcccgatcacggggtcccagaataccccaccccg
atcctcactttcctgcggcgcgtcaaggcctgtaacccaacagatgctgggcccatggtt
gtgcattgcagtgctggtgtgggccgaaccggctgcttcattgtcattgatgccatgctg
gagcggatgaagcacgagaagacggtggacatctacggccacgtgacatgcatgcgctcc
cagcgcaactacatggtgcagacagaggaccagtacatcttcatccacgaggccttgctg
gaggctgccacgtctggcaataccgaggtgcccgcacgcaacctcttggcccacatccag
aagctgtcccaggtgccaccaggcgagagcgttactttaatggagctggaattcaagaat
ctggccaattctaaagcacatacctcacgtttcatcagtgccaacctcccgtgcaacaaa
ttcaagaaccgccttgtgaacatcatgccgtatgagctgacgagagtgtgcctgcagccc
atccggggtgtcgagggctctgactacatcaatgccagcttcatagatggctacaggcgg
cagaaggcctacatcgccacgcagggaccactggccgagaccacagaggatttctggcgg
atgctctgggagcacgactccaccattgtggtgatgttgacaaagctgcgtgagatgggc
cgggagaagtgccatcagtactggcctgcagagcgctctgcccggtaccagtacttcgtg
gtggaccccatggcagagtacaacatgccacagtacatcctccgggagttcaaggtgacg
gatgccagggacggccagtcacggacaatccgccagttccagttcacagactggcctgag
cagggagtgccaaagacaggagagggtttcattgacttcattgggcaggtgcacaagacc
aaggagcagttcgggcaggatgggcccatcacagtgcactgcagtgctggggttgggcgc
actggtgtgttcatcacacttagcattgtgctggagaggatgcgctacgaaggtgtggtg
gatatgttccagatggtgaagaccttgcggacgcagcggccagccatggtgcagacagag
gaccagtaccagctgtgctacagagccgcattggagtaccttggcagctttgaccactat
gcaacgtaa
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integrated database retrieval system
