KEGG   Parus major (Great Tit): 107210247
Entry
107210247         CDS       T04864                                 
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
pmaj  Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pmaj03037]
    107210247 (IFT122)
Cilium and associated proteins [BR:pmaj03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   107210247 (IFT122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 WD40 Beta-prop_EML_2 Zn_ribbon_IFT122_C WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 EIF3I TPR_IF140-IFT172 Beta-prop_RIG_2nd WDR55 Beta-prop_TEP1_2nd TPR_IFT80_172 Beta-prop_WDR19_1st TPR_GEMI5 Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N eIF2A PEP5_VPS11_N WD40_MABP1-WDR62_1st WDR90_beta-prop_4th TPR_7 TPR_COPA_B Beta-prop_WDR75_1st Beta-prop_IFT140_2nd TTC7_N Beta-prop_SPT8 Zf_2nd_IFT121
Other DBs
NCBI-GeneID: 107210247
NCBI-ProteinID: XP_015496271
Ensembl: ENSPMJG00000006019
LinkDB
Position
12:20065913..20096186
AA seq 1184 aa
MRAALTWRDRAEQCIYDLAFKPDGTQLIIAAGNRLLVYDTSDGTLIQPLKGHKDTVYCVA
YAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVSYNPLTHQLASCSSGDFGLWS
PEQKSVSKHKTSSKITCCSWTNDGQYLALGMFNGIVSIRNKNGDEKVKIERPGGSSSPIW
SICWNPSRDERNDILAVADWGQKLSFYHLSGKQIGKDRVLNFDPCCISYFTKGEYLLLGG
SDRQVSLFTRDGVRLGTVGEQSSWVWTCKVKPDSNYVAVGCQDGTISFYQLIFSTVHGLY
KDRYAYRDNMTDVIVQHLITEQKVRIKGRELVKKIAIYKNRLAIQMPEKILIYELYSDDS
ADMYYRVKEKIIKKFECNLLVVCSDHIILCQEKRLQCLSFSGVKEREWLMESLIRYIKVI
GGPPGREGLLVGLKNGQILKIFVDNALALVLLKQSTAVRCLDMSASRNKLAVVDENDTCL
VYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQKLQGFVVGYNG
SKIFCLHVFSMSAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDADWRELAMEALEGLEF
ETAKKAFTRVRDLRYLELISSIEDRKKHGENNNELFLADVFAYQGKFHEAAKLYKRSGHE
NLALEMYSDLRMFDHAKEFLGSGDPKDTKMLIKKQADWAKDINEPKAAVEMYLSAGEHMK
AIEISGDHGWVDMLIEIARKLDKAEREPLAKCAFYFKQLDNPGYAAEIYMKAGDLKALVQ
LHVETHRWEEAFALSEKHPEFKDEVYVPYAQWLAESDRFEEAQKAFHKAGRQREAVQVLE
QLTHNAVLESRFNDAAYYYWMLSMQCLDIAQENQGQQTEMLKKFHHFQHLAEVYHVYHFI
QRYTEEPFSFHLPETLFNISRFLLHSLTKETPLGISKVNTLLALAKQSKALGAYKLARHA
YDKLHGLQIPDRFQKSVELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCR
QPFVFSASSYEVLHLVEFYLEDGITDEEAVALIDLEVPRVNKRENKWQEMMSDHTQSLKL
DDNTDITEDDDPFTAKLSFEQGGSEFVPVVVSRAVLRSMSRRDVLIKRWARPLRWQYYRS
LLPDASITMCPSCFQMFHTEDYELLILQHNCCPFCRRRIDESNQ
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgcgggccgcgctcacctggcgcgacagggcggagcagtgtatttacgacctcgcgttc
aagccggatgggacccagctgataattgctgctggaaacaggctgctggtgtatgatact
tctgatggaaccctaattcagcctctgaaaggacataaagacactgtgtactgcgtggct
tatgccaaagatggcaagcgttttgcatctggctctgctgataaaagtgtgataatttgg
acttcaaagttagaaggaattctgaaatacacgcataatgactctatccagtgtgtttca
tacaatcctctcactcatcagttggcatcctgctcatctggggattttggcttgtggtct
cctgaacagaagtcagtctctaaacataaaacaagctccaagattacttgctgtagctgg
acaaatgatggccagtaccttgctctggggatgttcaacggcattgtcagcataaggaac
aaaaatggtgatgagaaagtgaaaatagagaggccagggggctcttcctctccaatatgg
tcaatttgttggaatccttccagagatgaacgcaatgacattttagctgtggcagactgg
ggtcagaagctttccttttaccacctgagtggcaagcagattgggaaggacagagtactc
aattttgacccatgctgcatcagctactttactaaaggagagtatctcttgctgggaggt
tcagatagacaggtttctctcttcacgagggatggggtacgcctgggcaccgtgggagag
cagagcagctgggtgtggacctgcaaagttaaaccagactccaactacgtggcagtaggg
tgtcaggatggaacaatctccttctaccagctgattttcagcactgtccacggcctctat
aaagatcgctacgcctacagggacaacatgaccgatgttattgtccagcacctcatcaca
gaacaaaaagttaggataaaaggcagagagcttgtgaagaaaattgcaatctacaaaaac
agattagccatccagatgccagagaaaatcctgatttacgaattgtactcggatgactct
gcagatatgtactatcgggtgaaggaaaagatcataaagaaatttgaatgtaacttgctg
gtggtctgttcagatcacattattttatgccaggagaagagattgcaatgcctctcattt
agtggtgttaaagaacgggaatggctgatggaatctcttattcgttacattaaagtaatt
ggaggacctccaggaagagaaggcctcttagttggtctaaagaatggtcagatcctgaag
atctttgtggacaatgcgctggcgctcgtgctgctgaagcaatccacggccgtgcgctgc
ctggacatgagcgcgtcccgcaacaagctggccgtggtggacgagaacgacacctgcctc
gtctacgacatccacaccaaggagctgctgtttcaggaacccaatgctaacagtgtggcc
tggaatacccagtgtgaggatatgctttgcttttctggagggggttacctcaatatcaaa
gccagcaacttccctgtccaccagcaaaaactgcaaggctttgttgtgggttacaatggc
tccaagatcttctgccttcatgttttctctatgtcagcagttgaagttccgcagtctgca
cccatgtatcaatatctggaacgaaaaatgtttaaagaagcctatcaaattgcgtgttta
ggagtgacagatgctgactggagggagctggccatggaagccttagaggggctggagttt
gaaactgctaaaaaggcatttaccagggtacgagaccttcgatatttagaactgatcagc
agcatagaggaccggaagaagcacggtgagaacaacaacgagctgttcctggcagatgtt
tttgcctaccaggggaagttccatgaggcagcaaagctgtacaagaggagtggccacgag
aacctggccttggagatgtactcggacctacgcatgttcgaccatgccaaggaatttctg
ggatctggagatcccaaagacacaaagatgctgataaaaaagcaagcagactgggccaag
gatatcaatgagccaaaggcagcagtggagatgtacctgtctgcaggcgagcacatgaag
gccattgaaatcagcggggaccacggctgggtggatatgttaatcgaaattgctcgaaaa
ctggataaagctgagcgtgagcctctggccaaatgtgccttctattttaagcaacttgat
aaccctggctatgctgcagaaatctacatgaaggctggtgacctgaaagccttggtccag
ctccacgtggagactcatcgctgggaagaagcatttgctctgagtgagaagcatcctgaa
ttcaaagatgaagtctatgtcccttatgctcagtggctggcagagagtgatcgatttgag
gaagcccaaaaagcgtttcacaaggctggcaggcagagagaggctgtgcaggtgctggag
cagttaacacacaacgccgtgcttgaaagccgatttaacgacgcagcctattattactgg
atgctttccatgcagtgcttagacatagcccaagagaaccaaggacagcagactgaaatg
ttgaagaagtttcatcacttccagcatttggcagaagtttaccatgtctatcactttatt
caaagatacactgaggagcctttcagcttccacttgcctgaaactctcttcaatatttcc
agatttctgcttcacagcttaacaaaggagactcctttggggatctcaaaagtcaataca
ttattggccctggcaaagcagagtaaagctcttggtgcatataaattggctcgtcatgcc
tatgacaagctgcatggactgcagatcccagacaggttccagaaatccgtggagctgggc
agcctgacaatccgatccaagccattccatgacagtgaagagctcgtgcccctgtgttac
aggtgctccaccaacaaccctttgctgaataacctggggaatgtctgcattaactgcagg
cagcctttcgtcttctcggcctcctcctacgaggtgctgcatctggttgagttctatttg
gaagatggcatcacagatgaagaagctgtagctctcattgatcttgaagttccaagagtg
aataaaagagagaataaatggcaagagatgatgagtgaccatactcagagtttgaagctt
gatgacaatacagatataactgaagatgatgatccctttacagcaaaactgagctttgag
cagggaggctcggagtttgtgccggtggtggtgagccgtgccgtgctgcgctccatgagc
cgcagggatgtgctgatcaagcgctgggcgcggccgctgcgctggcagtactaccgctcc
ctgctgcccgacgcctccatcaccatgtgtccatcctgcttccagatgtttcacacagaa
gactatgagctcctcatactgcagcataattgttgtccattctgtcggcggagaatagat
gagtcaaaccaatga

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