Parus major (Great Tit): 107211707
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Entry
107211707 CDS
T04864
Symbol
TPCN1
Name
(RefSeq) two pore calcium channel protein 1 isoform X1
KO
K16896
two pore calcium channel protein 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107211707 (TPCN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmaj04040
]
107211707 (TPCN1)
Ion channels [BR:
pmaj04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
107211707 (TPCN1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TcdB_toxin_midC
ECSCR
Motif
Other DBs
NCBI-GeneID:
107211707
NCBI-ProteinID:
XP_015499546
Ensembl:
ENSPMJG00000017310
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Position
15:complement(9701823..9742507)
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AA seq
814 aa
AA seq
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MAVSMDDDVPLILTLDDSASAPLDEPDREELPNENGGSYDVVNDASSPAARECCAQQGSA
RHNWEMNYQEAAIYLQEGENNDKFFTHPKNAKALAAYLFAHNHLFYLMELSTALLLLLLS
LCEAPAVPMLRLGIFVHATLELFALIVVVFELSMKMRWLGFQTFIRHKRTMVKTCVLLVQ
FIEAIVVLVRQTSHVRITRALRCIFLVDCRYCGAVRRNLRQIFQSLPPFIDILLLLLFFM
VIFAILGFYLFSPNHSDPYFNTLENSLVNLFVLLTTSNFPDVMMPSYARNPWSCVFFIVY
LSIELYFIMNLLLAVVFDTFNDIEKRKFKSLLLHKRTAIQHAYRLLVTKQRPSGISFKHF
EGLLRFYKPRMCARERYLTFKALNQSNTPLVSLKDFYNFYEVVGLKWKAKRNREHWFDDL
PRTAFLIFKGINILVKSRVFQYTMYTVVAVNGIWILVETFMLQGGNFFSRNVPWSYIVFL
TIYGVELLLKTTGLGPVEYLSSGWNLFDFSVTLFAFLGLMALAFDMEPFYFIVVLRPLQL
LRLFKLKKRYRNVLDTMFELFPRMASLGLTLLIFYYCFAIVGMEFFAGVVYPNCCNTSTV
ADSYRWVNHTVGNRTVVEEGYYYLNNFDNILNSFVTLFELTVVNDWYIIMEGVTSQTTHW
SRLYFMIFYIVTMVVMTIIVAFILDAFVFRMNYTRKNQDSEEDNGIVLEKEISKEEVIGI
IELYKRTSAATETAQLQKIVLQMDKYGQMSTVFLGRRSRTKSDLSMKMYEEEIQEWYEEH
SRKEESQTPVQEPASASSSSLKPPSLRQRSQTVI
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgagcatggacgatgatgttcccctgatcctcaccctggacgacagcgcctca
gcccctctggatgagccggaccgggaggagctgcctaacgaaaatggaggcagctacgac
gttgtcaacgatgcctccagccccgcggccagggagtgctgcgcccagcagggctctgcc
cggcacaactgggagatgaactaccaagaggcagccatctacctccaggaaggagaaaat
aatgacaagttcttcactcaccccaaaaatgccaaagcactcgctgcctacctctttgca
cacaaccaccttttctacctgatggagctgagcacagccctgctgctcctgctgctgtcc
ctctgcgaggctccagcggtccccatgctccgtctgggcatctttgtccacgcaaccctg
gagctgttcgcgttaatcgtggtcgtctttgaactctcgatgaagatgaggtggctgggc
ttccaaacctttatcaggcacaaaaggactatggtcaagacatgtgtgctgttggtgcag
ttcatcgaggccatcgtggtgctggtgcgccagacctcgcacgtgcgcatcacccgcgcc
ctgcgctgcatcttcctcgtggactgtcgctactgtggggccgtcagaagaaatctgcga
cagatcttccagtccctcccaccatttattgacatccttctcctcctgctttttttcatg
gtgatatttgctattctgggtttttacttgttttctcctaaccactcagatccgtacttc
aataccttagagaacagcctggtgaatctctttgtgcttttgaccacttcaaatttccct
gatgtgatgatgccgtcctacgcccgcaacccctggtcctgtgtcttcttcatcgtgtac
ctctccattgagctctacttcatcatgaacttgcttctggctgttgtgtttgacactttc
aatgacattgagaagaggaagttcaagtccctgctgctgcacaagcgcacggccatccag
cacgcgtaccggctgctggtcaccaagcagaggccgtctggaatttccttcaagcacttc
gaagggctgctgcggttctacaagcctcggatgtgtgccagggagagatatctcaccttc
aaagcactgaatcagagcaatacccctttagtcagtctaaaggatttttacaatttctat
gaagttgttggcttaaaatggaaggcaaaacggaaccgcgagcactggtttgatgacctt
ccacggactgccttccttatttttaaaggcatcaacatcctggtgaagtcccgtgtgttc
cagtacacgatgtacactgtggtggctgtgaatggaatttggattcttgttgaaaccttc
atgttgcaaggagggaatttcttctccaggaatgtcccatggagttacatagtcttcctc
acaatctatggcgtggagctgctcctgaagaccactgggctggggcctgtggagtacctg
tcctcaggctggaatctctttgacttctcagtcaccctgtttgcatttttggggctcatg
gcactggcctttgacatggagcccttttacttcatcgtggtcctgcgacccctccagctg
ctgaggctgttcaaactgaagaaacgctacaggaacgtcctggacaccatgtttgaattg
ttccctcgcatggccagcctgggtttaaccctgctcatcttctactactgctttgccatc
gttggcatggagttctttgctggcgtggtctacccgaactgctgcaacacaagcacagtc
gcagactcctaccgctgggtgaaccacacagttggcaacagaacagttgtggaagaaggt
tattactatctcaacaactttgacaacattctgaacagctttgtgacactgtttgagctg
acggtggtcaatgactggtacatcatcatggaaggggtgacatcccaaaccactcactgg
agccgtctgtacttcatgatcttctacattgtgaccatggtggtgatgacaatcatcgtg
gctttcatcctggacgcttttgtcttccgcatgaactacacccggaagaaccaggattca
gaagaagataatggcattgtgctggagaaggagatctccaaggaggaggtgattggcata
attgagctgtacaagaggacttcagctgccactgaaacagctcagctgcagaagatcgtg
ttgcagatggacaaatacgggcaaatgtcaacggtgtttctgggacgcaggtcgaggacc
aagagtgatctgagtatgaagatgtatgaggaggagatacaggagtggtacgaggagcac
tccaggaaagaggaatctcaaacaccagtgcaagagcctgcatctgcttccagcagctct
ctgaagcccccaagcctccgacaacgctcccagactgtcatttag
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