Parus major (Great Tit): 107212318
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Entry
107212318 CDS
T04864
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj00514
Other types of O-glycan biosynthesis
pmaj04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
107212318 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107212318 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pmaj01003
]
107212318 (RFNG)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
107212318 (RFNG)
Glycosyltransferases [BR:
pmaj01003
]
Glycan extension
O-Glycan
107212318 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
107212318
NCBI-ProteinID:
XP_015500884
Ensembl:
ENSPMJG00000015219
LinkDB
All DBs
Position
18:155370..163255
Genome browser
AA seq
360 aa
AA seq
DB search
MSGPCLGLRRAGVLLSLGAAALLLLLLPRGQRPAVPRPPPAVGPSVLSPQRAGPEGSAGA
PGGAGLAGSPQLARRGRLGAAGNSARESLELKDIFIAVKTTRKYHKSRLDLLLQTWISQA
RGQTFIFTDWEDRELRLKAGDHMINTNCSAVHTRQALCCKMSVEYDKFLESGQKWFCHVD
DDNYVNPRTLLHLLSAFSHSQDVYVGRPSLDHPIEAADHVQSDGSKTTVKFWFATGGAGF
CISRGLALKMSPWASLGNFISTAERVRLPDDCTIGYIIEGLLEVKLLHSPLFHSHLENLQ
RLQGESVLQQVTLSYGDPENKHNVVSVGGVFGLQQDPTRFKSVHCLLYPDTIWCPAKKMS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcccttgcctggggctgcgcagggccggggtcctgctgtccctgggcgccgcc
gccctcctgctgttgctgctgccgcgggggcagcgccccgccgtgccccgcccgccgccc
gccgtcgggcccagcgtgctctcgccgcagcgcgcgggccccgagggctctgcgggagcg
ccgggcggcgcaggcctcgcgggtagcccgcagctggcgcggaggggccgcctcggggct
gccggcaactcggccagggagagcctggaactgaaggacatctttattgcggtgaagacc
acgaggaagtaccataagagccggctggacttgctcctccaaacctggatctcccaggcg
aggggacagacatttatattcacagactgggaggatcgggagctacgcctgaaagcaggg
gatcatatgatcaacaccaactgttctgctgtccatacccggcaagctctctgctgcaag
atgtctgtggaatatgataaattcctggaatctgggcaaaagtggttttgccatgtggac
gatgacaactatgtgaaccctcggactctcctacatctcctttctgccttttcacacagc
caggatgtctacgtggggcgaccgagtctggaccatcccatcgaagcagctgaccatgtc
caaagtgatggatcaaagacaaccgtgaaattctggtttgctacaggtggagctgggttc
tgcatcagccgaggtcttgccctgaagatgagtccctgggccagcctgggcaatttcatt
agtactgcagaaagagtgcgtcttcccgatgactgcactattggctacatcatcgaaggg
ctgctggaggtgaagctgctacacagcccattgttccattcccacctagaaaatcttcag
aggctgcaaggcgagtctgtgctgcagcaggtaaccctgagttatggtgaccctgagaac
aaacacaatgtcgtgagtgtgggaggagtgtttggtcttcagcaagatccaacccgattt
aaatccgtccattgtctgctttatcctgacactatttggtgccctgctaagaagatgtca
taa
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