Parus major (Great Tit): 107215173
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Entry
107215173 CDS
T04864
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X2
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03440
Homologous recombination
pmaj03460
Fanconi anemia pathway
pmaj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107215173 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
107215173 (BRCA1)
03460 Fanconi anemia pathway
107215173 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmaj01009
]
107215173 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmaj04121
]
107215173 (BRCA1)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107215173 (BRCA1)
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107215173 (BRCA1)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107215173 (BRCA1)
Protein phosphatases and associated proteins [BR:
pmaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107215173 (BRCA1)
Ubiquitin system [BR:
pmaj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107215173 (BRCA1)
Multi subunit type E3
BRCC complex
107215173 (BRCA1)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
107215173 (BRCA1)
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
107215173 (BRCA1)
BRCA1-A complex
107215173 (BRCA1)
BRCA1-B complex
107215173 (BRCA1)
BRCA1-C complex
107215173 (BRCA1)
BRCA complex
107215173 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
107215173 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
BRCT_2
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_6
RING_XB3-XBAT31
BRCT_3
zf-Nse
zf-C3HC4_3
zf-RING_5
RTT107_BRCT_5
zf-ANAPC11
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
107215173
NCBI-ProteinID:
XP_015506655
Ensembl:
ENSPMJG00000002201
LinkDB
All DBs
Position
27:complement(1986222..2006065)
Genome browser
AA seq
1806 aa
AA seq
DB search
MDFSVITIGQVQNVLSAMQKILECPICLDVVQEPVSTKCDHIFCRFCIFKHISKKKKGVV
ECPLCKTEVSKRSLKENSRFKQLIEGLLETIHAFELDTGVKFLKSHYFHKTSTDVTAAES
LCKESSVIQSKGFRNRRKSAKGNGQENLTLQESSVNIQLTDAKMCRSRNKPQKSDSQKGI
YIELGSESSEDFFKQASKTGFEDKVSVQISSQERLEELESAEKGNENSCNAQPDKLCAKE
TTLPNVIGESDFSKECLSKKSTQSIAECAKPDQVNVTECQSSALNILAVDLLPEQCDRTG
DASHLSPVDGDTSFRKNTEEMDKQETQYNSESQEFDSEDSSESRLDKSKEMDADVQSMGA
VEACEPENDSSHDNELPLEKLPQPETPQSATLNKISKKRLKQSIQKVNEWFSKSNEILSS
SSSLDESAASADVSGEGELCLSDKGSCISEKTDPLADSTEIPAVEGKKRWSKQTVEDIKG
KIFGKTYNNRRRKSNAPSTLRDVLPTRRKEDVAAEKCLNDFSKDRLKQKRKTACVLQPED
FIKKKKNTEEADRGPQSVNWGLGDAEKNRCDESVSVNESHLSQNKANKTLTELEEGGEPT
CKKASDKVTTRHCDGEPEMDNCDQKSTKKRSSAAKRCKHSSRNMCALQLVVDRSSVFRDP
AEPQIDSYPSSGEPRKADSEQNPVRRSRRLRILSEEMTKETRKGVKGARKKNSDCGRSVS
GDQRNVATRSAECKDLCEPQDELSYRPVTDLEGGDLEANEMQVSLKNLSDTAETGRSLFN
PSCQPSNCGSTVPDTCSQDSEILGSPLLLQLPSVSGGKTTSHQTEEVTESPTAFSQECGH
DSQNVPGDLKTEKLPMAENVLELTKEAEDSDLDTQYLRNIFRHSKRSSFSLFQTARQAHA
VKDPPPETSNPSCAAQVENKGGKQVQLESLQEEKAAAQNLSRVSEKEKTCESAHVDPVPC
FAVSTREHRDDILQAAEERTLTPAGAGTAQTEHKNGLLQEEQGNEKPVSNEIGIEKLRQN
PIKSNGSQSDQSNTDDDSRQNDVNTGQEISFSSEINQAGKTEVADCKGPVLHFQSPSIIC
PATCQQSPAEISCEVTETKSSKVVVPVKGNEEQAAHTVSTAVPKCSAAEEEPLGENRDLT
DLSETPNGLLCSDTDIEENSSLCETDRKEQSAVFVKSGNALGKELLKRNASSRPRSGGIQ
KSRRRVQKLPSSDEESCEDEDLPCFQTLIFSKSASTPLQTGKQMSSVAEPSVAECPVSPS
VLPHSVSNDNIVQEVPEAALSNVCVSPSQESECSVSLFSSQSNMSEEPLNGAQELKKHLP
HVSKQMSSVNNSKETSQNCSGGLKTTKDECQEFPDIGANLGEASGYDSEISVVEDSCGPF
SQGEILTTQQKNAMQNSLRKLQREMAVLEAALKQNGSQSCEVLPVHRELPHSSTEGALET
DQMREGKNRSPELVLSSSKSSSTKRSDLEKGPECDSVLKKETPSEKTKPVQEAVQEHRQC
QLEEENSKEKKSGTRQHSASVSSLSGNVTQCPDNSSCSVRLFTPQAAEATDEPVVAQNTD
KSCGPGHKLKTSECFPVPVLHNATGEKNDTSPVVTKRKEMSIVASGLNHSEHLVVQKFVK
KTQSTLSNHITEGTTHVIMKTDEELVCERTLKYFLGIAGGKWVVSYQWIIQSFKEGRILD
EENFEVRGDVINGRNHQGPKRARQALTEKIFKGFEICCCGPFTGMTTEHLEWMVELCGAS
VVKQPDLFTHTANSTAVVVVQPDAWKEDLDYRAIHQQSNVAVVTREWVLDSVACYECQEF
SAYLLS
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcagtgattactattggacaagtacaaaatgtgctttcagccatgcagaag
atcttggagtgcccaatatgcttggatgtggtacaagagcctgtttcaacaaaatgtgat
cacatattctgcagattctgcatattcaaacatatcagcaaaaagaagaaaggtgtggta
gagtgtcctctgtgtaagacagaagttagcaagagaagtctgaaagaaaattccagattt
aagcaactaattgaaggattgttggaaactatccatgcttttgagcttgacactggagtg
aagtttttaaagagtcattactttcataaaacatccacggatgtcactgctgctgagtcc
ttgtgtaaagaaagttctgtcatccaaagtaaaggcttcagaaacaggagaaaaagtgct
aaaggaaatggacaagaaaacttaaccttgcaggaatctagtgtgaatattcagcttaca
gatgccaaaatgtgtcgctcaagaaacaaaccccagaaatctgattctcaaaagggtatt
tacatagagttgggctctgaatcatctgaagattttttcaaacaggcaagcaaaactggg
tttgaagacaaagtatcagttcagatttcttctcaagaaaggctggaagaacttgagagt
gctgagaaggggaatgaaaattcttgcaatgcacagcctgacaagctgtgtgccaaagaa
acaacgctaccaaatgtcataggtgaaagtgatttctcaaaggaatgcttgagcaagaaa
agcactcagagcattgctgaatgtgccaaacctgaccaagtgaatgtgactgaatgccag
agttctgctttaaatatccttgctgtagacctgctcccagagcagtgtgacaggacaggt
gatgccagtcacctgtcacctgtggatggggacacatcattcagaaagaacacagaagaa
atggataaacaggaaacccagtacaacagtgaaagccaagagtttgattcagaagacagt
tcagagagcaggctggataaaagcaaggaaatggatgctgatgtacaaagtatgggagct
gtagaggcatgtgaacctgagaatgactcttcccatgacaatgaacttcctctggagaag
ctgcctcagccagagacacctcagtctgccaccctgaataaaatctccaagaagagactg
aagcagagcattcagaaagtcaatgaatggttttcaaaaagtaatgaaattttgtcttcc
agttcttccctggatgaatctgctgcatcagctgatgtttcaggtgaaggagaactgtgt
ttatcagataaagggtcttgtatttcagaaaaaactgaccctttggcagattccacggaa
attccagcagtggaaggaaaaaagaggtggtcaaaacaaacagtagaagacatcaaaggc
aaaatatttgggaaaacatacaacaacagaaggaggaaatcaaatgccccttctaccttg
agagacgttttgcctactaggagaaaggaagatgtggctgctgaaaagtgcctgaatgat
ttcagcaaagacagactcaaacaaaagaggaagactgcctgtgtcctgcaacctgaggat
ttcataaagaaaaaaaaaaatacagaagaagcagacaggggccctcaaagtgttaactgg
ggccttggagatgctgaaaagaatagatgtgatgaaagtgtttctgttaatgaaagtcac
ctctctcagaataaggcaaataagacactaacagagcttgaggagggaggggaacccaca
tgcaagaaagcttctgacaaggtcactaccaggcactgtgatggggaaccagaaatggat
aactgtgatcagaaaagcaccaaaaaaagaagttctgcagcaaaaagatgcaagcattct
agtagaaatatgtgtgctctgcagttagtagtggatagaagctctgttttccgtgatcca
gctgagccacagatcgatagctatcccagcagtggggagcccaggaaagctgattctgag
caaaatccagtcagacgcagcagaaggcttcggatcctttctgaagaaatgacaaaagaa
acaaggaaaggagtaaagggagcaagaaagaaaaacagtgactgtggaaggtctgtctct
ggagaccaaaggaatgtggcaactcgctctgctgagtgcaaagacctgtgtgagcctcaa
gatgagctgagttacaggccagtcactgatttggaaggaggtgatctggaagcaaatgaa
atgcaggttagtctaaagaatttatctgacactgcagaaactgggagaagtctgttcaat
ccttcatgtcagccttcaaactgtggctccactgtgcctgatacgtgttctcaagacagt
gaaatactaggtagccctctcctcctacaacttccttcagtgtctggtgggaaaactact
tctcaccagactgaagaggtgactgaatcacctactgctttttcccaggagtgtggacat
gattcacaaaatgttccaggggacttaaaaactgaaaagttgccaatggctgaaaatgtg
ttggaattgaccaaggaagctgaggacagtgacttggacacgcagtatctgcgaaatata
tttaggcattcaaagcgctcctccttcagcctttttcagactgccaggcaggcacatgca
gtgaaagatcctcctcctgaaacctccaatccatcatgtgctgctcaggtagaaaataaa
ggtggcaaacaggtacaattggaaagcttacaagaggagaaagcagctgctcaaaacttg
agcagggtttctgagaaagagaagacctgtgagtctgcccatgttgatcctgtgccttgc
tttgctgtcagcacaagagaacacagggatgacattttacaggctgcagaggaaaggact
ctaacaccagcaggagcagggactgctcagactgagcacaaaaatggattgctacaagaa
gagcagggcaatgaaaagccagtgtcaaatgagatagggatagaaaagttgagacagaat
cccatcaaaagtaatggaagccaaagtgatcagagtaacacagatgatgattccagacaa
aatgatgtaaacacaggccaggaaatcagcttcagttcagaaatcaatcaggcaggaaag
actgaagttgctgattgcaaaggaccggttctacattttcaatccccatcaataatttgt
cctgcaacttgtcagcaaagccctgctgaaatcagctgtgaagtcactgaaacaaaaagt
agcaaagtagtagttcctgtgaaggggaatgaagaacaagcagcccatactgttagcaca
gcagtgcccaaatgttcagctgcagaggaggaacctcttggagagaatcgtgacctcaca
gatttgtctgaaacccctaatggcttgctgtgctctgatactgatattgaggagaacagc
agcttatgtgaaactgataggaaagaacaatctgcagtgtttgtaaaaagtggcaatgcc
ctgggaaaagagctgctcaagagaaatgcaagttccaggccaagatctggaggtattcaa
aagtctcgaagacgagttcagaaactgccatcttcagatgaagagtcctgtgaggatgaa
gatttaccatgctttcagacattaatcttcagcaaatcagcaagcacacctttgcagact
ggtaaacaaatgtcatctgtggcagagccttcagtggcagagtgtccagtgagtcccagt
gtgttgcctcacagtgtgagtaatgacaatattgtgcaggaagtgcctgaagctgcccta
agtaatgtgtgtgtttcaccaagccaggagtcagaatgctctgtcagcttattttcttcc
cagtccaacatgtctgaagaaccacttaatggagcacaagagctgaagaaacatttacca
catgtgtccaaacaaatgagcagtgtaaacaacagtaaagaaacttctcagaactgtagt
ggagggctgaagacaaccaaagatgaatgtcaagaatttccagacattggagcaaatcta
ggtgaagcatctggatatgacagtgaaataagtgttgtagaagattcctgtgggccattc
tctcagggggaaatcctcactacacagcagaagaatgctatgcagaatagcctgagaaaa
cttcagcgagaaatggctgtgcttgaagcagcactaaagcagaatggaagtcagagctgt
gaagttttacctgtccacagggaactgccacattccagtactgagggggcacttgaaaca
gatcaaatgagagaaggaaaaaacaggtctccagaattggttctctcatcttctaaatcc
tcttcaacaaagagatcagatctggagaaaggccctgagtgtgacagtgttctgaagaag
gaaactccctctgaaaagacaaaacctgtgcaggaagcagtgcaagaacacaggcagtgt
cagctggaggaagaaaattcgaaggagaagaaatctggaaccaggcaacacagtgcatct
gtctcatcactttctggaaatgtgacccagtgtccagataactcttcctgctctgtaagg
ctttttacccctcaagctgcagaagccacagatgagcctgttgtagctcagaacactgat
aaaagctgtggcccaggacacaaattaaagacaagtgaatgttttcctgtacctgttctg
cacaatgcaactggggaaaaaaatgatacaagtccagttgtgaccaagaggaaagaaatg
tcaattgtggcatcaggtctgaatcacagtgagcatctggtggtccagaagtttgtgaaa
aaaactcagagcactttatctaatcacattactgaaggaacaacccatgtcataatgaaa
acagatgaggagctggtgtgtgaacggactctgaagtatttcctgggcattgcaggagga
aaatgggtagttagttatcagtggataattcagtcttttaaagaaggaagaatactggat
gaggagaactttgaagtcagaggagatgtaatcaatgggcgaaaccatcaaggtcctaag
agggccagacaggccctgactgaaaagatctttaaaggctttgagatctgttgctgtgga
cctttcactggtatgactacagagcatctggagtggatggtggagctgtgtggtgcctct
gtggtgaagcagcctgacctgttcacacacacagcaaattctactgctgttgtggttgtg
cagccagatgcttggaaggaagacttggattatagagcaatccaccagcagagcaatgtt
gctgtggtaactcgggaatgggtcctggacagcgtggcttgctacgagtgccaggagttc
agtgcttacctcctgtcctaa
DBGET
integrated database retrieval system
