Parus major (Great Tit): 107215322
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Entry
107215322 CDS
T04864
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmaj04040
]
107215322 (SCN4A)
Ion channels [BR:
pmaj04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107215322 (SCN4A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
107215322
NCBI-ProteinID:
XP_015506905
Ensembl:
ENSPMJG00000004143
LinkDB
All DBs
Position
27:complement(3388706..3440653)
Genome browser
AA seq
1843 aa
AA seq
DB search
MAGLPHIPGPENLRPFTPASLAAIEQRMAEAEALRIKRQHVEMPEEEEIKPSSDLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYMLGPFHPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTMSNPPAWSKNVEYAFTGIYTFESLIKILSRGFCI
DDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPHNSTFLEDLGLDNDTLVN
STFYDFMDDFTGNFTGNFTGNFTSNSTFDFEAYISDEANYYFLEGALDALLCGNSSDAGK
CPEGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFV
VIIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKQQEEQERLLQE
RGSSSDSLASSVAGKGHDSDLNSDQDKAKDCNGQVVPKITLQRSDTVIDFNPTYEPEKPD
LNHLTVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLIWNCCLPWV
KLKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEM
VLKLIALDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPT
LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISVDCTLPRWHMN
DFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSF
SADSLAASDDDGEMNNLQIAIGRISRGIAFAKATLLALLRRLWKGKKVAPEEEQDPSKRD
NSVINHMDMALEPKSGYLDGITGKEHIFMDDLDHMNFINNPNLTVQVPIASEESDLYEET
STQSDTEDTTKNPLSSDNASSVCSTVDYKPPAPEEEEVAEVAEESNEPEECFTEGCVKRF
PCLYVDITSEKGKVWWNLRKTCFLIVEHDWFETFIVFMILLSSGALAFEDIYIERHKVIR
TILEYADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLVSLTANWLGYSEL
GAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLF
AGKYYRCVNTTTGELFDINVVNNKSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVAT
FKGWMDIMYAAVDSREIEEQPQYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQK
KKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKVQGKVFDFVTKQVFDITIMIL
ICLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRHYFFTVGWNIFDFV
VVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITTSAGWDGLL
NPILNSGPPDCDPELENPGSSVKGDCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFS
VATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLRVPKPNKIKLV
TMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTL
KRKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSQDALGEDAPEKEGLIATKMQEIYGN
TGTDVETAPALGLEPIPSSETPQDAPEEAQAWAKERVVKESLV
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacatcccgggccccgaaaacctgcgccccttcaccccggcctcg
ctggccgccatcgagcagcgcatggccgaggccgaggcgctccggataaagcggcagcac
gtggagatgcccgaggaagaggagatcaagcccagcagtgacctggaagccggcaagaac
ctgcccctcatctatggtgacccacccctggagctcatcgggacccccctggaggacctg
gaccctttctacaaggacaagaagacgttcatagtcctcaacaagggcaagtccatcttc
cgcttctcagccacccctgccctctacatgctgggccccttccaccccatccgcagagga
gccatcaaagtcctcatccattcattattcagcatgttcatcatgatcaccattttaacc
aactgtgtgtttatgacaatgagcaaccccccagcgtggtccaagaacgtggaatatgcc
ttcactgggatctacaccttcgagtctctcatcaagatcctgtcaagaggcttctgcatc
gatgacttcacattcctgcgagacccgtggaactggctggacttcatggtcatctccatg
gcctacattactgagttcgtggacctggggaacatctccgctctcaggaccttccgtgtc
ctccgtgccttgaaaaccatcacagtgataccagggctgaagacgatcgtgggggctctg
atccagtcggtgaagaagctctcggacgtgatgatcctcacggttttctgcctgagtgtc
ttcgccctcatcggcctccagctcttcatggggaacctccggcagaagtgtgtgcggtgg
cctccccacaacagcaccttcctggaggatttggggctggacaacgacaccttggtcaac
tcaaccttctatgacttcatggatgacttcactgggaacttcaccgggaacttcaccggg
aacttcaccagtaacagcacctttgacttcgaggcctacatcagcgatgaagccaattac
tacttcctggagggagcccttgatgccctgctctgtgggaacagcagcgacgctgggaag
tgccccgagggctacgagtgcatgaaggccggcaggaaccccaactatggctacaccagc
tacgacaccttcagctgggccttcctggccctcttccgcctcatgacccaggactactgg
gagaacctcttccagctgacactgcgggcagcagggaaaacctacatgatcttttttgtg
gtgatcatcttcctgggctccttctacctcatcaacctcatcctggccgtggtggccatg
gcttatgctgagcagaacgatgccaccatgctggaggagcagcagaaggaggaggaattc
cagcagctcatggagcagctgaagaagcagcaagaggagcaggaaaggctgttgcaggaa
cgcggatccagcagcgattccctggccagcagcgtggccgggaaggggcacgactcagac
ctcaacagtgaccaggacaaggccaaggactgcaacgggcaggtggtgcccaagatcacc
ctgcagagatccgacaccgtgattgatttcaaccccacctatgagccggagaagccggat
ctcaaccacctcactgtgggcaaccaagatgggccagggctggagaagagggtgggaagt
gccatcagtgtcatctccaatgctgtggaagaactggaagaagctcaccagaaatgccca
ccctggtggtacaaatttgcccacacattcctgatctggaattgctgcctcccgtgggtg
aagctgaaggagtttgtcaagctggtggttatggacccctttgtggacctgggcatcacc
atctgcatcgtgctcaacactctcttcatggccatggagcactaccccatgacggaggag
tttgagaatgtgctgaccgtggggaacctggtcttcacagggatcttcacggcagagatg
gtcctgaaactcattgctctggatccctatgagtatttccagcagggctggaacatcttc
gacagcttcattgtcactctgagcctggtggagctgggcttggccaacgtgcaagggctc
tccgtgctccgctccttccgcctgctgagggttttcaagctggccaagtcctggcccacc
ctcaacatgctcatcaagatcatcggcaactccgtgggcgccctgggcaacctcactctg
gttctggccatcatcgtcttcatcttcgccgtggtggggatgcagctcttcggcaagagc
tacatcgagtgcgtgtgcaagatctctgtggactgcaccctgccccgctggcacatgaac
gacttcttccactccttcctcatcgtcttccgcatcctctgcggggagtggatcgagacc
atgtgggactgcatggaggtggccggccagaccatgtgcctcatcgtcttcatgatggtc
atggtcatcgggaacctcgtggtgctaaacctgttcctggctctgctgctgagctccttc
agcgccgacagcctggcggcgtcggacgatgacggggagatgaacaacctgcagatcgcc
atcggccgcatcagccgcggcatcgccttcgccaaggccacgctcctcgcgctgctgcgc
cggctctggaagggcaagaaggtggcaccagaggaagagcaggaccccagtaaaagggac
aactctgtgattaaccacatggacatggccctggagcccaagtcagggtacctggatggc
atcacaggaaaggagcacattttcatggatgacctggaccacatgaatttcatcaacaac
cccaacctgacggtgcaagtccccatcgcctccgaggagtccgacctctacgaggagacc
agcacccagtccgacaccgaggacaccaccaagaaccccctgtccagcgacaatgcctcg
tccgtgtgcagcaccgtggattacaaaccccccgcgcccgaggaggaggaggtggcagaa
gtggctgaggagagcaacgagcccgaggagtgtttcactgaaggctgtgtgaagaggttc
ccctgcctctacgtggacatcaccagtgagaaggggaaggtttggtggaacctcaggaaa
acctgttttctcatcgtggaacatgactggtttgagaccttcatcgtcttcatgatcctc
ctcagcagcggggcactggcttttgaggacatctacattgagcggcacaaggtgatccgc
accatcctggaatacgcagacaaggtcttctcctacatcttcgtcatcgagatgctgctc
aagtgggtggcctatggcttcaaggtgtacttcaccaatgcctggtgctggctggatttc
ctcatcgtggatgtgtccctggtcagcctgacagcaaactggctgggatactccgagctg
ggagccatcaaatccctgcggacattgagggctctgcgacctctgcgtgctctgtcccgg
tttgagggcatgagggtggtggtgaatgccttgctgggtgccatcccctccatcatgaac
gtcctgctggtctgcctcatcttctggctgatcttcagcatcatgggggtgaacctgttc
gcagggaagtactacaggtgtgtcaacaccaccacgggtgagctcttcgacatcaacgtg
gtcaacaacaagagcgactgcatggccctgctccacaccaacgaggtcagatgggtcaac
gtcaaggtcaacttcgacaacgtgggcttgggatacctgtccctgctgcaggtggcaacc
ttcaaaggctggatggacataatgtacgcagccgtggactcgcgtgagattgaagagcag
ccacagtatgagatcaacctctacatgtacatctattttgtcatcttcatcatctttggt
gccttcttcaccctgaatctcttcatcggcgtcatcatcgacaacttcaaccagcagaag
aaaaagtttggaggcaaagacatcttcatgacggaagagcagaagaaatactacaacgcc
atgaagaagctgggctccaagaaaccccagaagcccatccccaggccagcgaacaaagtc
caagggaaagtgtttgactttgttaccaagcaagtgtttgacatcaccatcatgatcctg
atttgcctgaacatggtgaccatgatggtagaaacagatgaccagagtgagctcaaaacc
tctgtcctctacaagataaacctggtcttcatcgtcatcttcactggggagtgcgtgctc
aagatgtttgccctgcgccactactttttcactgtgggctggaacatcttcgacttcgtg
gtggtcatcctctccatcctaggtattgtcctctcggacatcatcgagaagtactttgtg
tcccccaccctcttcagggtcatccgtctggcgaggatcggccgcgtgctccggctgatc
cgaggagccaaaggcatccggacgctcctctttgccctgatgatgtccctgcccgccctg
ttcaacatcggcctcctgctcttccttgtcatgttcatctactccatcttcgggatgtcc
aacttcgcctacgtcaagaaggagtcagggatcgatgacatcttcaactttgaaacgttt
gggaacagcatcatctgcctcttccagatcaccacgtcagcggggtgggatgggctcctc
aaccccatcctcaacagtggccccccggactgtgaccccgagctggagaaccctgggagt
tcagtgaaaggagactgtgggaacccctccattggcatcttcttcttctgcagctacatc
atcatctccttcctcatcgtggtgaacatgtacattgccatcatcctggagaacttcagt
gtggccacagaggagagcagcgagcctctctgtgaagacgattttgaaatgttttatgaa
acttgggagaagtttgacccggatgccacccagttcatcgcctacagcaccttgtctgac
tttgtggacaccttgcaggagccactcagagttcccaagcccaacaagatcaaacttgtc
accatggatctaccaatggttgctggggacaaaatccactgcctagacatcctctttgcc
ctgactaaggaagtgctgggagactcaggagagatggatgccctgaaggccaccatggag
gagaagttcatggctgccaacccctcaaaagtttcctacgaacccatcaccaccaccctg
aagaggaaacatgaggaggtctgtgctaccaagatccagagggctttccggagatacctg
ctgaggcgctcggtgaaacaggcgtcctacatgtaccggcacagccaggacgccctgggc
gaggacgcgcccgagaaggaaggactgatcgccaccaaaatgcaggagatctatgggaac
actgggacagatgtggagacagcccctgccttgggcctcgagcccattcccagctcagag
acacctcaggatgctcctgaggaagcacaggcttgggctaaggaacgtgtggtgaaggaa
tcgctggtgtaa
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integrated database retrieval system
