Pedobacter mucosus: LOK61_10420
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Entry
LOK61_10420 CDS
T08291
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pmuo
Pedobacter mucosus
Pathway
pmuo01501
beta-Lactam resistance
pmuo01503
Cationic antimicrobial peptide (CAMP) resistance
pmuo02020
Two-component system
pmuo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LOK61_10420
09132 Signal transduction
02020 Two-component system
LOK61_10420
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOK61_10420
01503 Cationic antimicrobial peptide (CAMP) resistance
LOK61_10420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmuo02000
]
LOK61_10420
02044 Secretion system [BR:
pmuo02044
]
LOK61_10420
01504 Antimicrobial resistance genes [BR:
pmuo01504
]
LOK61_10420
Transporters [BR:
pmuo02000
]
Other transporters
Pores ion channels [TC:
1
]
LOK61_10420
Secretion system [BR:
pmuo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LOK61_10420
RTX toxin transporter
LOK61_10420
Multiple protein transporter
LOK61_10420
RaxAB-RaxC type I secretion system protein
LOK61_10420
Antimicrobial resistance genes [BR:
pmuo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LOK61_10420
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LOK61_10420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UKT62177
LinkDB
All DBs
Position
2512777..2514168
Genome browser
AA seq
463 aa
AA seq
DB search
MSHRSLFYPLLLILILHSFISSAQILSLKQAVSTALTNYGTIRAKNNYASASKETIKQYK
RDYLPNFSLSAQQDYGTINGQNGPQYGFGGLGTASAGPALDTQNWNAAFGALYLANVNWD
FFTFGKIRERIKVANAAYQRDQNDFEQEKFQQEIRVSAAYLNLLAAQRLTISQEKNLYRA
ITFKNTAVIRAKNGLIAGVDSSFAKAEVSSAKIALTKARDLEQEQANRLGVLMGLTSTSY
KLDTASITRIPLDLMNDTAIKSAHPVLKFYKNRFDVSEQQANYLRRLYYPTFSFFGVMQG
RGSGFSSGYLLNQTAFSSSYVDGINPTRGNYLIGIGVTWNLSTLLKNHPQVRAQQYISQG
LKEEYNLVDQQLHAQLALAEAKLKNALENYNEAPIQVKAASDAYLQKSVLYKNGLTNLVD
LTQAIFTLNRAETDRDIAFTNVWQALLLKSAALGNYDIFINEF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatagatctttattttatccactattattaatcttaattcttcattcattcatt
tcaagtgcacaaatattaagcttaaagcaagctgtttctaccgctttaacaaattatgga
actataagagcgaaaaataattatgcaagtgcttccaaagaaacgattaagcaatataaa
agagattatttaccaaactttagtttaagtgcacaacaagattacggaactattaacggg
caaaatggtccgcagtatggttttggcggattaggaacagcatctgctggtccggcgtta
gatacccaaaattggaatgcagcttttggagcgctttacctagcgaatgtaaattgggac
ttttttactttcggaaagataagagaacgcattaaggtagcaaatgccgcctatcaaaga
gatcaaaatgattttgaacaagaaaaatttcagcaagaaattcgggtttcggcagcatat
ttaaatttattagccgcacaaagattaacaatatctcaagagaaaaatctttatcgagcc
ataacttttaaaaatacagccgtaatcagggctaaaaatggcctaattgcaggcgttgat
tcatcgtttgcaaaggcagaagtttcttcagcaaaaattgctttaactaaggctagagat
ttagaacaggaacaagctaatagattgggcgttttaatgggcttaacttcaacatcatac
aaattagatacggcatcgattacaaggattcctctcgatttaatgaatgatactgcaatt
aaaagcgctcatcccgtgctaaaattttataaaaatcgatttgatgtaagcgaacaacaa
gcaaattatttaagaagactttactacccaactttttctttcttcggagtgatgcaaggt
cgtggctcgggttttagttcgggttatttacttaatcaaactgctttttcttcaagttat
gttgatggaataaacccaactcgtggtaattatttaatagggattggcgtaacttggaac
ttaagcactttgctaaaaaatcatccacaagttcgagcacagcaatatataagtcagggt
ttaaaagaagagtataatttagttgatcaacaattacatgcacagcttgctttggcagaa
gctaaactcaaaaacgcgttggaaaattacaatgaagctcctattcaggttaaggccgca
tctgatgcttacctacaaaaaagtgttttatataaaaatggattaaccaatttagtcgat
ttaactcaagctatttttactttaaatcgtgctgaaaccgatcgagatattgcctttaca
aacgtttggcaggctcttcttttaaaatctgccgctttaggcaattacgatatatttatc
aacgaattttaa
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