Populus trichocarpa (black cottonwood): 7487251
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Entry
7487251 CDS
T01077
Name
(RefSeq) short-chain dehydrogenase TIC 32 B, chloroplastic
KO
K11153
retinol dehydrogenase 12 [EC:
1.1.1.300
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop01100
Metabolic pathways
pop01240
Biosynthesis of cofactors
Brite
Enzymes [BR:
pop01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.300 NADP-retinol dehydrogenase
7487251
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GFIT
Motif
Pfam:
adh_short
adh_short_C2
KR
Epimerase
Motif
Other DBs
NCBI-GeneID:
7487251
NCBI-ProteinID:
XP_002309049
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Position
6:complement(6248867..6252355)
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AA seq
322 aa
AA seq
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MSFFSLVTGRPGTSGFGSASTAEQVTQGIDASNLTVLITGGASGIGLETTRVLALHKAHV
IIAARNMVAANEAKQLILKEDEDARVDVLKLDLSSIKSIREFADNLNSLDLPLNILINNA
GIMFCPYQLSEDGIEMQFATNHLGHFLLTNLLLDKMKETARTTGVEGRIVNLSSVAHIHT
YKDGIRFNNINDKKRYSDKRAYGQSKLANILHAKELSRRFQEEGVNITANAVHPGLIMTN
LFKHSAILMRTLKFFSFFLWKNVPQGAATTCYVALHPSLKGVTGKYYVDCNSLGPSAFAR
DEALARKLWDFSNKLITSVSKA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttttcgttagtgacaggaaggcctggtactagtgggtttggatcagcttct
actgctgagcaggttacacaggggatcgatgcttccaatcttactgtccttatcactggt
ggagcaagtggaattggtttggagacgacaagagtgctggctttacataaagcccatgtc
attattgctgccaggaacatggttgctgcaaacgaagctaaacaacttattcttaaagag
gatgaagatgcccgtgttgatgtcctaaaacttgatctgtcctctatcaaatccattaga
gaattcgctgataacttaaattctctcgatctgcctctcaacatcttaattaacaatgct
ggcatcatgttttgcccctaccagctctcagaagatggaatagagatgcaatttgccaca
aatcacctgggtcattttctcttgacaaatctgctccttgacaaaatgaaagagaccgca
agaaccaccggtgtcgaggggaggattgtgaatttgtcatcagttgcccacattcacact
tacaaagatgggatccggttcaataatattaatgacaagaagagatattctgacaaaagg
gcttatggccaatccaagttggcaaacatactgcatgccaaagagctttcccgtcgcttt
caggaagagggtgtgaacattactgcaaatgcagtccatccagggttgattatgacaaat
ctcttcaaacactctgcaattttaatgagaactttgaagttcttttcgtttttcttatgg
aagaacgtgcctcagggggcagccacaacatgctacgtcgcgttgcacccgagcttgaaa
ggtgttaccggtaaatactatgtggactgcaatagcttggggcccagtgcatttgctaga
gatgaagcattggcaaggaaactgtgggacttcagcaacaagctgattacttctgtttca
aaagcttga
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