Polaromonas sp. SP1: DT070_00730
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Entry
DT070_00730 CDS
T05689
Name
(GenBank) channel protein TolC
KO
K12340
outer membrane protein
Organism
pos
Polaromonas sp. SP1
Pathway
pos01501
beta-Lactam resistance
pos01503
Cationic antimicrobial peptide (CAMP) resistance
pos02020
Two-component system
pos03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DT070_00730
09132 Signal transduction
02020 Two-component system
DT070_00730
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DT070_00730
01503 Cationic antimicrobial peptide (CAMP) resistance
DT070_00730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pos02000
]
DT070_00730
02044 Secretion system [BR:
pos02044
]
DT070_00730
01504 Antimicrobial resistance genes [BR:
pos01504
]
DT070_00730
Transporters [BR:
pos02000
]
Other transporters
Pores ion channels [TC:
1
]
DT070_00730
Secretion system [BR:
pos02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DT070_00730
RTX toxin transporter
DT070_00730
Multiple protein transporter
DT070_00730
RaxAB-RaxC type I secretion system protein
DT070_00730
Antimicrobial resistance genes [BR:
pos01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
DT070_00730
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
DT070_00730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AYQ30302
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All DBs
Position
150336..151676
Genome browser
AA seq
446 aa
AA seq
DB search
MPARPVMLPLSIAIAMVLAAAAPLAGAQSLVDLYESARAYDAAYQSAKLQYDANLAKADQ
AKAGILPTAGISAGVTRTGFENTAPVTDRSFNTQNAALNLSQPLYRPGNWATYQQAAKQV
DQSKAQLEAANQDLIVRTSQAYFDVLAAQDTLAFVRAQKAAVAEQLASAKRNFEVGTSTI
TDTREAQARYDLVIAQEIAAENDLRVKKLALDTLVGRTEAQPRPLLVPVNLPAIEPADVS
TWVEQSELVHPNVRLAQSGLEIAELEVKKAEAGHKPTVDVQAAYNVTRNPSGTATTIPPF
AFRTNTTTVGVVLNVPLFAGFATQNRVRETLSLRDKAQSDLEGARRTVAQATRTAYFGVQ
SGQGQVKALEAAELSSQSALDANKLGYQVGVRINIDVLNSQSQLFQTKRDLAKARYDVLL
GDLKLRQANGTLTPEDLQKINALLAK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
ctgccggcccgcccggtgatgttgcctctgtcgattgcgatcgccatggtgctggcagcc
gctgcgcccctggcaggcgcgcagagtcttgtcgacctgtacgagtcggcacgcgcctac
gatgcggcctaccagtcggccaagctgcagtacgacgccaacctggccaaggccgaccag
gccaaggccggcattttgcccacggcgggcatttcggcgggcgtgacgcgcacgggtttt
gaaaacaccgcacccgtgaccgaccgcagcttcaacacgcaaaacgccgcgctgaatctc
tcgcagccgctgtaccgcccgggcaactgggccacttatcagcaggccgccaagcaggtc
gatcagtccaaggcgcagctggaggccgccaatcaggatttgatcgtgcgcaccagccag
gcctacttcgacgtgctggccgcgcaggacaccctggcttttgtgcgcgcacaaaaagcc
gcggtggccgagcaactggcctccgccaaacgcaactttgaagtgggcacctccaccatc
acggacacacgcgaagcacaggcccgctacgacctggtgatcgcccaggaaatcgccgcc
gagaacgacctgcgcgtcaagaagctcgccctggacacgctggtcggcaggaccgaagcg
caacccaggccgctgctggtgccggtcaacctgccggccatagagcccgccgacgtgagc
acctgggtggagcagtcagagctggtgcaccccaacgtgcgcctggcgcaaagcgggctg
gagatcgcggagctggaagtcaaaaaagccgaagccggccacaaacccaccgtggacgtg
caggccgcttacaacgtgacacgcaacccgtccggcaccgccaccaccattccgcccttt
gcctttcgcaccaacaccaccaccgtcggtgtggtactcaacgtgccgctgtttgccggc
tttgccacgcaaaaccgcgtgcgcgaaacgctctcgctgcgcgacaaggcccagagcgac
ctcgaaggcgcacggcgcaccgtggcccaggccacccgcaccgcctacttcggcgtgcag
tcgggccaggggcaggtcaaggcgctggaagccgcagaactttccagccagagcgcgctg
gacgccaacaagctgggctaccaggtcggcgtgcgcatcaacatcgacgtgctgaactcg
caaagccagctgttccagaccaagcgcgacctggccaaggcacgctacgacgtgctgctg
ggcgacctcaagctgcgccaggccaacggcacgctgacgccggaagacctgcagaaaatc
aacgcgctgctggcaaagtaa
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