Pectobacterium parvum: LOZ86_19340
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Entry
LOZ86_19340 CDS
T07916
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
ppav
Pectobacterium parvum
Pathway
ppav01501
beta-Lactam resistance
ppav01503
Cationic antimicrobial peptide (CAMP) resistance
ppav02020
Two-component system
ppav03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LOZ86_19340
09132 Signal transduction
02020 Two-component system
LOZ86_19340
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOZ86_19340
01503 Cationic antimicrobial peptide (CAMP) resistance
LOZ86_19340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppav02000
]
LOZ86_19340
02044 Secretion system [BR:
ppav02044
]
LOZ86_19340
01504 Antimicrobial resistance genes [BR:
ppav01504
]
LOZ86_19340
Transporters [BR:
ppav02000
]
Other transporters
Pores ion channels [TC:
1
]
LOZ86_19340
Secretion system [BR:
ppav02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LOZ86_19340
RTX toxin transporter
LOZ86_19340
Multiple protein transporter
LOZ86_19340
RaxAB-RaxC type I secretion system protein
LOZ86_19340
Antimicrobial resistance genes [BR:
ppav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LOZ86_19340
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LOZ86_19340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
WH4_Lhr
DUF4439
Motif
Other DBs
NCBI-ProteinID:
UFK39005
LinkDB
All DBs
Position
complement(4296277..4297698)
Genome browser
AA seq
473 aa
AA seq
DB search
MPQITHGKIRLLAYFPVALLLLQCWSSTAFGQTISFNQAWARLLQSDDSIAAEHAGVDRA
QFLKEAAKGLYWPQVNVGASYTRLDKPVELDARDLNPLSNHRDIFAALNQLINTSGNPFV
TRFTEQNVITSSVQVVWPLFTGGRIDAAQSIRSAQANEAEQMLIVRTLAQFEALAQTYYG
VVMAHQVMKTRQDIEKGMAQHYDHARKLEAQGQIARVEVLSAQSAYDMARIETQKARRSM
ETTEMVFAKLIKTEDATPSSSLFVNKTLPELPALVKQTLNTHPGLKVLSAKRDQAKDLIR
IERAKYAPDVFLFGNYQLYEQDTLAARTTPGWMVGVGVSVPLISREGRSDTIAAAKSAEM
QVNYLEADMRQNLEIVVESTWREARLALEEFNSLSSTEKLAEENVQLRNKAFMQGMSTSL
DVVDALNQLAGAKTQRASAAYRYVVSIARLMAISGQINRFSDYQTQYAIQVTP
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaataacacacggaaaaatccggcttctggcttatttccccgtcgcactgctg
ctgttacagtgctggtcgtccacggcatttgggcaaaccatctcgtttaatcaggcctgg
gctcgcctgctgcaaagtgatgacagtattgccgccgaacacgctggggtcgatcgtgcg
cagttcctgaaagaagccgccaaaggactctattggccgcaggtcaacgtgggcgcaagc
tatacgcgcctcgataaacctgtcgagctggacgcgcgcgacttaaatccgctgtcgaac
catcgggacatcttcgccgcgctaaatcagctgattaataccagcggcaatcccttcgtc
acccgtttcacagaacaaaatgtgataaccagctccgttcaggtcgtctggccgttattt
accggaggccggattgatgcggcacaatcgattcgctctgcgcaggccaatgaagctgaa
cagatgctgatcgtccgcacgctggcgcagtttgaggcactggcacagacttattacggc
gtggtgatggcacatcaggtgatgaagacgcgtcaggatatagagaaaggtatggcacag
cactatgaccacgcccgcaagctggaagcgcaaggccaaatcgcccgagtcgaggtgctg
tccgcccagtccgcttatgacatggcgcgtatcgaaacacaaaaggcgcggcgcagtatg
gagaccaccgaaatggtcttcgcaaagctgatcaagaccgaagacgcaaccccttcgtct
tcgctgttcgtcaacaaaacgctccccgaactgcctgcgctggtgaaacaaacgctcaac
acgcatcccggcctaaaggtgctctctgccaagcgcgatcaggctaaggatctcatccgt
attgagcgcgccaaatacgctcctgacgtatttctgttcggtaactatcaactctatgag
caggacacgctagcggccagaaccacgccgggctggatggtcggcgtcggcgtttccgtc
ccgctcatcagccgagaaggtcgttccgacactatcgccgccgcgaaaagtgcagaaatg
caggttaattatctggaagccgatatgcggcagaatcttgaaatagtagtcgagagtacg
tggcgagaagcccggctggcgctggaagagttcaattccctgtcttcaacggagaaactg
gccgaagagaacgtccagctacgcaacaaggcatttatgcaaggtatgtctacctcgctg
gacgtcgtggatgcgctaaaccaactcgctggtgccaaaacgcaacgcgcctctgcagcc
tatcgttacgtggtgtccatcgccagattgatggcaatttccggccagataaaccgtttc
tctgactaccagacccaatacgccatacaggtaacgccatga
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