Pseudomonas putida BIRD-1: PPUBIRD1_4710
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Entry
PPUBIRD1_4710 CDS
T01975
Name
(GenBank) TolC family type I secretion outer membrane protein
KO
K12340
outer membrane protein
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb01501
beta-Lactam resistance
ppb01503
Cationic antimicrobial peptide (CAMP) resistance
ppb02020
Two-component system
ppb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PPUBIRD1_4710
09132 Signal transduction
02020 Two-component system
PPUBIRD1_4710
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PPUBIRD1_4710
01503 Cationic antimicrobial peptide (CAMP) resistance
PPUBIRD1_4710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppb02000
]
PPUBIRD1_4710
02044 Secretion system [BR:
ppb02044
]
PPUBIRD1_4710
01504 Antimicrobial resistance genes [BR:
ppb01504
]
PPUBIRD1_4710
Transporters [BR:
ppb02000
]
Other transporters
Pores ion channels [TC:
1
]
PPUBIRD1_4710
Secretion system [BR:
ppb02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PPUBIRD1_4710
RTX toxin transporter
PPUBIRD1_4710
Multiple protein transporter
PPUBIRD1_4710
RaxAB-RaxC type I secretion system protein
PPUBIRD1_4710
Antimicrobial resistance genes [BR:
ppb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
PPUBIRD1_4710
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
PPUBIRD1_4710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADR62268
LinkDB
All DBs
Position
5256078..5257511
Genome browser
AA seq
477 aa
AA seq
DB search
MLRKLSLAIAVSCASNGVVWAADVPSTVKTDLVSVYQEAVDNNADLAAARADYGARREVV
PQARAGLLPNLSAGAEMMNTRTKLDEPSITSNRSGNAWSATLAQPIFRADRWFQLQAAEA
VNEQAALELSATEQNLILQTAQNYFAVLRAQDNLAATKAEEAAFKRQLDQSNERFDVGLS
DKTDVLQSQASYDTARANRIIAERQVQDAFEALVTLTNREYTSIQGVVHSLPVQVPTPND
AKAWVETAGRQNLNLLATNYAVSAAEETLRQRKAGHAPTLDAVAKYQKGDNDSLGFTNPS
QLGVRYSGDVEQTSVGLQLNIPIYSGGLTSSQVREAYQRLSQSEQQRESLRRQVVENTRN
LHRAVNTDVEQVQARKQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYTSVRDYNNS
RYDYILDNLSLKQAAGTLSPQDLQDLKRYLKPDYNPDKDFLPPDLAAAAAKNFERRP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcaaactctcactggcgatagccgtgtcttgtgcgtccaacggagtggtctgg
gcagcggacgtgccctcgacagtcaaaaccgatctggtcagcgtctaccaggaagcagtg
gacaacaacgccgacctggctgcagcacgcgccgattacggggcgcgccgcgaagtggtg
ccgcaggcccgcgccgggttgctgccaaacctgtcggccggtgccgagatgatgaacacc
cgcaccaagctggacgagccatccatcacgtccaatcgcagcggcaacgcctggagcgcg
accctggctcagccgatcttccgcgctgatcgctggttccagttgcaagccgccgaagca
gtcaacgaacaggcagcactggagctgtcggcgaccgagcaaaacctgattctgcaaacc
gcgcaaaactacttcgccgtcctccgcgcccaggacaacctggccgccaccaaggcagaa
gaagccgccttcaagcgccagctggatcagtccaacgagcgtttcgacgtgggcctttcg
gacaagaccgacgtgctgcaatcccaagccagttatgacactgcacgggccaaccggatc
atcgccgaacgccaggtgcaggatgccttcgaggccctggtgaccctgaccaaccgtgag
tacacctctatccagggcgtggtgcatagcctgccggtacaagtgccaacgcccaacgat
gccaaagcctgggtcgaaaccgccgggcgccagaacctcaacctgctggccaccaactac
gcggtttctgccgcagaagagaccctgcgtcagcgcaaggccgggcatgcaccgaccctg
gacgccgtggcgaagtaccagaagggtgacaacgacagccttggcttcaccaacccatcg
caactgggggtgcgctacagcggcgacgtcgagcagaccagcgttggcctgcaactgaac
atcccgatctacagcggcggcctgaccagttcgcaggtacgcgaggcttaccagcgcctg
agccagagcgagcaacagcgtgaaagcctgcgccgccaggtcgtggaaaacacccgcaac
ctgcaccgcgctgtgaacaccgatgtggaacaggtacaggcgcgcaagcagtcgatcatt
tccaaccagagcgcgctggaagccaccgaaatcggctaccaggtcggtacccgcaacatc
gtcgacgtgcttgatgcccagcgccagctgtacacctcggtacgcgactacaacaatagc
cgctacgactacatcctcgacaacctgagcctgaagcaggcagccggcaccctgagcccg
caagacctgcaggacctgaagcgctacctgaaacctgactacaacccggacaaggacttc
ctgccgccggacctggcggcagcagcggccaagaacttcgagcgcaggccttga
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