Candidatus Pelagisphaera phototrophica: GA004_05230
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Entry
GA004_05230 CDS
T09061
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht01501
beta-Lactam resistance
ppht01503
Cationic antimicrobial peptide (CAMP) resistance
ppht02020
Two-component system
ppht03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GA004_05230
09132 Signal transduction
02020 Two-component system
GA004_05230
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GA004_05230
01503 Cationic antimicrobial peptide (CAMP) resistance
GA004_05230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppht02000
]
GA004_05230
02044 Secretion system [BR:
ppht02044
]
GA004_05230
01504 Antimicrobial resistance genes [BR:
ppht01504
]
GA004_05230
Transporters [BR:
ppht02000
]
Other transporters
Pores ion channels [TC:
1
]
GA004_05230
Secretion system [BR:
ppht02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
GA004_05230
RTX toxin transporter
GA004_05230
Multiple protein transporter
GA004_05230
RaxAB-RaxC type I secretion system protein
GA004_05230
Antimicrobial resistance genes [BR:
ppht01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
GA004_05230
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
GA004_05230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QXD33114
LinkDB
All DBs
Position
1188014..1189456
Genome browser
AA seq
480 aa
AA seq
DB search
MSWMMLLSFRSSRAGACTVSRWRDTRGKWGTAQALALKLGIFVSAITTSFGQDERPPEEP
DTFDLKTALSYALDNNFNIRRAIEQIEEQEGIIVEVKARTRPSLSLDANYQKLDGGLSEV
VEGFGIATDNTWGISLNLRQALYQGGGIKAALKAQDLTRESVRLFLESTIMDAMLEVTTR
YYGTLLARDQIEVEEQNVELLEETLEDAQNRLRAGSVSDFEVLRAEVLLANAKPALIRRR
SAFRVAIDQLRRSIGYGNYRRDSNNLEKVPEFLGELKYELVAYDLAICLDLALSNRSELE
RLRLIEEARDAGLEIARSDYRPSVDLIGSYGKRKSNFSESFDDGPEGWTVGVVATWDIFD
GAARKGRVRQARSQLEQSRIERDSLRLAIEVEVRQAMSEFREAEELVNAAAKAVEQAEEA
LRLADSRYNAGAINQLDVFEARFALTDSRTNRLEAYYRHIVAVANLKRAMGEDKPALDSN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagttggatgatgctacttagttttaggagttctagggccggtgcttgcactgtttct
cggtggagagatacgaggggaaaatggggcacagcccaggcactggccctaaaattgggg
atctttgtatccgcgattaccacgagttttgggcaggatgaacggccgcctgaagagccg
gatacgttcgatctcaaaacggcactcagttatgctctggataacaacttcaacattcgt
cgagcgatcgagcaaattgaggagcaggaagggataatcgtggaagtaaaagctcggacg
cgtcccagcttgtccttggatgcgaattatcaaaaacttgatgggggtctgagtgaggtg
gttgaaggattcggtattgcgacggacaatacctggggaatcagcctcaacctgcgccag
gctctctaccaagggggcggcattaaggcggcgttgaaagctcaggacctgacgagggaa
tcagtgaggctctttcttgaaagtacgattatggacgccatgctggaagttacgacgcgg
tactacggcacattgctggctcgtgaccagattgaagttgaagagcaaaatgtcgagttg
cttgaggaaaccttggaagatgctcagaatagacttagagccgggtccgtttccgatttt
gaggttctgcgagcagaagttttattggctaatgcgaaacccgccttgattcgtcgtcgt
agcgcatttcgtgtcgccatcgatcaactacgccgaagtatcggatatggaaactatcgc
cgtgattcgaataatctggagaaggttcccgagttcttgggagagctaaaatacgaactg
gtcgcctacgacttggcgatttgcctagatttggccttatcgaatcgctccgaactggaa
cgacttcgcctgattgaagaagcccgagatgccggtttggaaattgcccgctcagactac
cgtcccagtgttgatttgattggaagctacggaaaacgtaagagcaatttttctgaatct
ttcgatgacgggcccgaaggttggaccgtgggcgtggtggcgacttgggacatcttcgac
ggggcggctcgtaaaggacgggtgcgtcaagcccgctcacagttggagcaatctcggatc
gagcgggattctctccgcttggcgatcgaggttgaagtgcgccaggcgatgtcagagttc
cgagaggcggaggaattggtgaacgccgccgccaaggcagtcgagcaagccgaggaagcg
cttcgtctggcggatagtcgctataatgcgggagcgataaaccagcttgatgtgtttgaa
gcccggtttgccttaaccgattctagaacgaatcgcctcgaggcttattaccgacatatt
gtcgcggttgcgaatcttaagcgtgccatgggtgaagataaacctgcactcgattcaaac
tga
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