Pseudomonas putida ND6: YSA_00187
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Entry
YSA_00187 CDS
T02170
Name
(GenBank) RND efflux system outer membrane lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi01501
beta-Lactam resistance
ppi02024
Quorum sensing
Module
ppi_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YSA_00187
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
YSA_00187
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppi02000
]
YSA_00187
01504 Antimicrobial resistance genes [BR:
ppi01504
]
YSA_00187
Transporters [BR:
ppi02000
]
Other transporters
Pores ion channels [TC:
1
]
YSA_00187
Antimicrobial resistance genes [BR:
ppi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
YSA_00187
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
YSA_00187
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
YSA_00187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Secretin_N_2
CtIP_N
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
AFK66877
UniProt:
I3UN06
LinkDB
All DBs
Position
complement(93064..94554)
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AA seq
496 aa
AA seq
DB search
MTFAQTPLHRALQALTRGRGSRLLGAGLCVALLSACTLSPDYHRPELNSTAAQFKHAEGW
TQASPSDAIARGAWWEIYGDAGLNALVEELNRSNQTVAQSEAQYRQAQALVRSSRAALFP
SLDLSASKNRSAQGTGSSSSSLSNNSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASA
EASFADLASIRLSQQSELVQNYLQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGP
DAVAQARTQLKSTQADLIDLIWQRAQFENAIAVLLGKTPADFALADSKAIPALPQIPVSL
PSQLLERRPDIAAAERNVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYW
SVGPQLALTLFDAGKRSAEVDRTVAVYDQTVAQYRQTVLDGFKEVENLLVQLKVYGDEAV
VRQEALDAARESLRLTENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVA
ALGGGWDAEQAFAEQN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgcccagaccccacttcaccgtgccctgcaggcactgacccgtggccgtggc
tcgcgcctgcttggtgccgggttgtgcgtggccttgctcagtgcctgtaccctgagcccg
gactaccatcgccccgagctgaacagcacggcggcgcagttcaagcatgccgaaggttgg
acccaggcctcgccgtccgacgccatcgcccgtggcgcctggtgggaaatctacggtgat
gccgggctcaacgcgctggtcgaagagcttaaccgcagcaaccagaccgtggcgcaatca
gaagcccagtaccgccaggcccaggcgctggtgcgcagcagccgtgcggcgctgttcccc
agcctggacctgagcgccagcaagaaccgttcggcgcagggcaccggcagctccagttcc
agcctgtccaataacagcagcggcattcgcaacacctacaacgcgcagttgggcgtgagc
tgggagatcgacctgtggggcaagctgcgcgaaaccctgaatgccaacgaggccagtgcc
gaagcgagtttcgccgaccttgcgtcgatccgcttgagccaacagtcggagctggtgcag
aactacctgcaattgcgggtgatcgatgagcagaagcgcttgctggaagccaccgtggcg
gcttatgagcgctcgctgcgaatgaacgaaaaccagtaccgcgccggtgtcgccggcccg
gatgccgtggcccaggcccgtacgcagctcaaaagcacccaggctgacctgattgacctg
atctggcagcgtgcgcagttcgaaaacgccatcgccgtgctgctgggcaagacacctgcc
gacttcgccctggccgacagcaaggcgattccagcgttgccgcaaataccggtttcgctg
ccttcgcagctgctggagcggcgtccggacatcgctgcggccgaacgcaacgtgatggcg
gccaacgccaacatcggggtgtcgcgggcagcctacttcccggacctcagcctgagcatg
agtggtggttattccagcagcagcttcagcaactggatcgagttgcccaaccgctactgg
tcggtaggcccgcagttggcgctgaccctgttcgacgccggcaaacgcagcgccgaggtc
gaccgcacggtggccgtgtatgaccagacggtggcgcagtaccgccagaccgtgctggac
ggcttcaaggaagtggaaaacctgctggttcaactgaaggtgtatggcgatgaagccgtg
gtgcgccaagaggcgcttgacgccgcccgggagtcgttgcgcctgaccgaaaaccagtac
cgtgccgggctgatcggctatctggatgtggtcaacgtgcaaaccacggcgctgagcaac
gagcgcagtgtgctgaacctgctgcaagggcgcctggtggccagcgtgcaactggtggct
gcgttgggcggcggctgggatgcagaacaggcgtttgccgagcagaattga
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