Pseudomonas putida ND6: YSA_02166
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Entry
YSA_02166 CDS
T02170
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi01501
beta-Lactam resistance
ppi01503
Cationic antimicrobial peptide (CAMP) resistance
ppi02020
Two-component system
ppi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
YSA_02166
09132 Signal transduction
02020 Two-component system
YSA_02166
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
YSA_02166
01503 Cationic antimicrobial peptide (CAMP) resistance
YSA_02166
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppi02000
]
YSA_02166
02044 Secretion system [BR:
ppi02044
]
YSA_02166
01504 Antimicrobial resistance genes [BR:
ppi01504
]
YSA_02166
Transporters [BR:
ppi02000
]
Other transporters
Pores ion channels [TC:
1
]
YSA_02166
Secretion system [BR:
ppi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
YSA_02166
RTX toxin transporter
YSA_02166
Multiple protein transporter
YSA_02166
RaxAB-RaxC type I secretion system protein
YSA_02166
Antimicrobial resistance genes [BR:
ppi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
YSA_02166
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
YSA_02166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Sigma54_AID
Cytochrom_D1
Motif
Other DBs
NCBI-ProteinID:
AFK67941
UniProt:
I3UR20
LinkDB
All DBs
Position
complement(1153061..1154446)
Genome browser
AA seq
461 aa
AA seq
DB search
MMCMVAWQAVAVEGKGGEGVVPKGVSASTYALDLVGLYREARLEDPRVLAAYARARSASE
QQRAALGNLLPQVSANANSSRILRKNEAQRDIYNTETYSLSLTQYLYNKPAWERYQKSKS
VNDQKGHEAEDQLAEATVDLAKRYFVALAADDELALVQAERRATQKNLDRVSSMFERQMA
KITDKLDMQARVDFLLAQEVEARNQVLVSREALAEIVGRPITEPLSRVRNDVILQAPTRP
LQSWVTQAIETNPLLKSYQSGAEAANAAVREGKGEHYPQLGLSLSAQQNDQGYDNTQTPR
SDSYVASLGLKIPIYSGGSTSARVRGLYDDQLAAEEQLEGVRRQVVRETTTAYLTAQAAV
EKIRANRNALSSAQQSSVAAQKAFTFGVVNAVDVLTAVQNEFKARRDLLKTQYDFITNLF
LLNRWAGELNEESVNNVNVWLSPVPETSLPGGEVARVDGRS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcatggtcgcctggcaggcggtggccgttgaagggaagggtggtgaaggtgtg
gtgccgaaaggggtttcggcctctacctacgcgttggacctggttgggctttaccgtgag
gcgcgcctggaggacccacgggtcctcgctgcttacgcacgtgcgcgctctgccagcgag
cagcaacgggcggcgctgggtaacctgctaccgcaggtttcggccaatgccaactccagc
cgcatcctgcgcaagaatgaagctcaacgcgacatttataacaccgaaacatactcgctc
agccttacccagtacctgtacaacaagccggcctgggaacgttaccagaaatccaagagc
gtgaatgaccagaaaggtcacgaggccgaagaccagctggctgaggccacggtcgacctt
gccaagcgctacttcgtagccctggctgccgacgacgaactggctttggtgcaggctgag
cgtcgggcaacccagaaaaacctcgatcgcgtcagcagcatgttcgagcggcagatggcc
aagatcaccgacaagctcgacatgcaggcgcgggtagatttcttgcttgcgcaagaagta
gaggcgcgtaatcaggtgctggtaagtcgcgaggccttggccgagattgtcgggcggccg
attaccgagccgctcagccgggtacgcaatgatgtgatattacaggcccccacccggccc
ttgcagagctgggtgacccaggcgattgaaaccaacccattgctcaagtcgtatcaaagc
ggggcagaggcggccaacgcggcggtgcgcgaaggcaagggcgagcactacccgcaattg
ggtttgagtttgagtgcgcagcagaacgaccagggttatgacaacacccagacgccacgc
agtgacagctatgtggcctccctggggttgaaaatcccgatctacagcggtggttccact
tccgcccgggtgcgtggcctgtacgatgaccagctggcagccgaggagcagctggaaggc
gtgcggcgccaggtggtcagggaaaccaccaccgcctacctgacagcacaggctgcggtc
gaaaaaattcgcgcgaaccgcaatgcgctttcgtcggcgcagcagtccagtgttgcggcg
cagaaggccttcacctttggcgtggtcaatgcggtggatgtgctcacggcggtgcagaat
gagttcaaggcccggcgcgatctgttgaagacgcaatacgacttcattaccaacctgttc
ctgctcaaccgctgggcgggcgaattgaatgaagagagcgtgaataacgtcaatgtctgg
ctcagcccggtgccggaaaccagcctgccgggtggtgaggtggctcgggtggatggccgt
agctga
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