Pseudomonas plecoglossicida: RK21_00094
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Entry
RK21_00094 CDS
T03646
Name
(GenBank) RND efflux system outer membrane lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj01501
beta-Lactam resistance
ppj02024
Quorum sensing
Module
ppj_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RK21_00094
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RK21_00094
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_00094
01504 Antimicrobial resistance genes [BR:
ppj01504
]
RK21_00094
Transporters [BR:
ppj02000
]
Other transporters
Pores ion channels [TC:
1
]
RK21_00094
Antimicrobial resistance genes [BR:
ppj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RK21_00094
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
RK21_00094
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
RK21_00094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6403
Motif
Other DBs
NCBI-ProteinID:
AJG11602
UniProt:
A0A099N3Y1
LinkDB
All DBs
Position
93874..95403
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AA seq
509 aa
AA seq
DB search
MPRRIIRTLNAFSACALALTLSGCIGTWGIAPQSKTLQANTLTTDAAIREAATDAHWPDQ
QWWHAYGDPQLDRWVALAVAGSPSLAMAAARVREAKAMAGVVESAEKLQGNGQATLKRHN
WPEDQFYGPGALSGANTWDNNAAIGFSYALDLWGRERNASEQAVDQAHMSVAEARQAQLE
LQNNVVRAYIQLSLHFAQRDIVKAELEQQEQILALAKRRLDAGIGTHFEVSQAEAPLPET
HRQLDSLDEEIALARNQLAALAGKGPGEGAQLQRPSLALAAPLRLPSNLPAELVGQRPDV
VASRWQVAAQARGIDVAHAGFFPNVDLVGSLGFMATGGGPLEFLTGRKFNYNVGPAISLP
IFDGGRLRSQLGVASAGYDVAVARYNQTVVGALKNISDQLIRRESMKEQSHFAAESVAAA
QKTYDIAMVAFQRGLTDYLNVLNAQTLLFRQQQVQQQVQAARLIAHAELVTALGGGLQAG
QDVPKEERQAAPKTPATLAILDKKPDNAE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgtcgcatcatcagaacgctcaatgcgttcagtgcctgtgcccttgccctcacc
ttgagcggctgtatcggaacctggggcattgccccgcaaagcaagacgctgcaagccaat
accctgaccaccgacgcggccatacgcgaagccgcgaccgacgcccactggcccgaccag
cagtggtggcacgcctatggcgacccacaactggaccgctgggttgccctggccgtggcc
ggcagcccgagcctggccatggctgcggcgcgggtgcgcgaagccaaggccatggccggc
gtggtcgagtcggcggaaaaactccagggcaacggccaggccacgctcaagcgccacaac
tggcctgaagaccagttctatggcccgggcgcgctgtccggcgccaatacctgggacaac
aacgccgccattggcttcagctatgcgctcgacctgtggggccgcgaacgcaacgccagc
gagcaggccgtggaccaggcgcacatgagcgtggccgaagcccgccaggcgcagctggag
ctgcagaacaacgtggtgcgcgcctacatccagctgagcctgcacttcgcccagcgcgat
atcgtcaaggccgagctggaacagcaggagcagatcctggccctggccaagcgccgcctg
gatgccggcatcggcactcacttcgaagtcagccaggccgaagcaccgttgccggaaacc
caccgccagctcgacagcctggacgaagaaattgccctggcccgcaaccagctggccgcc
ctggccggcaagggcccgggggagggcgcgcagttgcagcgcccgagcctggccctggcc
gcgccgctgaggctgccgtcgaacctgccggccgaactggtcggccagcgccccgacgtg
gtcgccagccgttggcaggtagccgcccaggcgcggggcatcgatgtcgctcacgccggc
ttcttccccaacgtcgacctggtcggcagccttggcttcatggcaaccggtggtggcccg
ctggaattcctcaccgggcgcaagttcaactacaacgttggcccggccatcagcttgccg
atcttcgacggtggccgcctgcgctcgcagctgggcgtggcctcggcgggctatgacgtg
gccgtggcgcgctacaaccagaccgtggtcggtgcgctgaagaacatctccgaccagctg
attcgccgtgagtcgatgaaagagcagtcgcacttcgccgccgagtcggtagcggccgcg
cagaaaacctacgacattgccatggtcgccttccagcgtggccttaccgactacctcaac
gtgctcaacgcccagaccttgctgttccgccagcagcaggtgcaacagcaggtgcaggct
gcccgcctgattgcccatgccgagctggtcaccgccctgggcggtggcttgcaggctggt
caggatgtgccgaaagaggagcgccaggccgcaccgaaaaccccggccaccctggccatt
ctcgacaagaagccggataacgccgaatga
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