Pseudomonas plecoglossicida: RK21_02235
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Entry
RK21_02235 CDS
T03646
Name
(GenBank) multidrug transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj01501
beta-Lactam resistance
ppj02024
Quorum sensing
Module
ppj_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RK21_02235
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RK21_02235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_02235
01504 Antimicrobial resistance genes [BR:
ppj01504
]
RK21_02235
Transporters [BR:
ppj02000
]
Other transporters
Pores ion channels [TC:
1
]
RK21_02235
Antimicrobial resistance genes [BR:
ppj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RK21_02235
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
RK21_02235
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
RK21_02235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AJG13743
LinkDB
All DBs
Position
2379686..2381191
Genome browser
AA seq
501 aa
AA seq
DB search
MKTSFAFTRPARTLAPLALAAALTGCSMAPKYDRPAAPIDTAYPLGAAYVEPAAATPDDA
ITAEIGWRDFFRDPLLQQLIGISLENNRDMRKAALNVEAAQALYRIQRAEMLPNLGVSAR
GASERVPADLSTTGQSDVLRRYDVAGVTAAWELDLWGRIRSLSDRALASYLALDETRIAT
QMSLVSEVASAYLTLRADQELLRLTSDTLATQKRSYGLTTQLVEAGNSTQLDLRRAEIAL
RTAEANHAAYTRQAAKDRNALVLLLGQPLTPELSRQLDEAMALPDDIVPTGLPSGLPSEL
LARRPDIRAAEQMLIGANANIGAARAAFFPTISLTGSAGTASASLDGLFDSGSRAWSFLP
QITLPIFRGGALRANLDVAHVQKRIEIANYEKSIQAAFAEVADGLAGKRTLDEQIRAEQL
LVAASQKAYELAEQRFQEGVDDNLTVLDAQRTHYGTQQTLVRTRLTRLNNLIHLYKALGG
GWTEHTVQSGATAQQSARSPG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatctttcgcattcacacgacccgccaggacgctggcgccgctcgccctcgcg
gcggcgttgactggctgctccatggcaccgaagtatgaccggcccgcagcgccgatcgac
acggcttatcccttgggcgcggcctatgtggaaccggcggccgcgacgcccgacgacgcg
atcacggccgagatcggctggcgggacttcttccgcgacccgctgctgcagcagttgatc
ggcatttcactggagaacaaccgcgacatgcgcaaggccgcgctcaacgtggaggcggct
caggcgctgtaccgtatccagcgtgccgagatgctgccgaacctgggcgtttccgcccgc
ggcgcgtcagagcgcgtaccggccgacctcagcaccacggggcaaagcgacgtgctccgg
cgctacgacgtggccggggtgacggccgcctgggaactggacctgtggggccgcatccgc
agcctcagcgaccgggcgctggcgtcctacctggccctcgacgagacccgcatcgccacg
cagatgagcctggtgtccgaggtggccagcgcctacctcacgctgcgtgccgaccaggaa
ctgctgcgcctgacgagcgacaccctcgccacgcagaagcgctcctacgggctgaccacc
caactggtggaagcgggcaactccacgcagctcgacctgcgccgcgcagagatcgcgttg
cgcaccgccgaggccaaccatgccgcctacacacggcaggcggccaaggaccgcaacgcg
ctggtgctgctgttgggccagccgctgacgccggagctgtcccggcagcttgacgaggcc
atggcgctgccggacgacatcgtgccgaccggcctgccgagcggcctgccgtccgaactg
ctcgcgcgccggccggacatccgcgccgccgagcagatgctgatcggcgccaacgccaac
atcggcgcggcgcgggccgcgttcttcccgacgatcagccttacgggctcggcgggcacg
gccagcgcttcgctggacggcctgttcgattcgggctcgcgggcctggagcttcctgccg
cagatcacgctgcccatcttccgcggcggcgcgctgcgcgccaacctggacgtggcgcac
gtacagaagcgcatcgagatcgccaactacgagaagtccatccaggcggccttcgccgag
gtggccgacggcctggcgggcaagcgcacgctcgatgagcagatccgcgcggagcagctc
ctggtggcggccagccagaaggcctacgagctggccgagcagcgcttccaggagggcgtg
gacgacaacctcactgtactcgacgcgcagcgcacgcattacggcacgcagcagaccctg
gtgcgcacgcgcctgacgcggctgaacaacctcatccatctgtacaaggcgctgggcggc
ggctggactgagcacacggtgcaatcgggcgccacggcgcagcagtccgcccggtcgccg
ggatga
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