Pandoraea pnomenusa DSM 16536: LV28_00565
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Entry
LV28_00565 CDS
T03411
Name
(GenBank) MarR family transcriptional regulator
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm01501
beta-Lactam resistance
ppnm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LV28_00565
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LV28_00565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppnm02000
]
LV28_00565
01504 Antimicrobial resistance genes [BR:
ppnm01504
]
LV28_00565
Transporters [BR:
ppnm02000
]
Other transporters
Pores ion channels [TC:
1
]
LV28_00565
Antimicrobial resistance genes [BR:
ppnm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LV28_00565
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LV28_00565
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LV28_00565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AIU25251
UniProt:
A0A378YBX3
LinkDB
All DBs
Position
3058082..3059599
Genome browser
AA seq
505 aa
AA seq
DB search
MKAASPFLPRQRVRSAISALSLAVVTLGFAGCANFAGIHSDKQISTPDQYQTQRSLPSEG
GQWPGTDWAQRFGDPQLVSLIDEALAGNPDLAMAAARLKAAQAQTEGAAAALLPSVGFQG
DVYREKFTENTIYPPGYGGTWFTQGDLTASLSWELDLWGKNRAARAQATSAERAEEAEDQ
EVRLALATAVARSYNQLAQQYALHDVLERVARQRENLGKLTADRVRAGLDTQVEQKQADS
NTADIQTQIAQLDGQILLTRHQLGVLLGKGPDRGLDISRPTLAKLPTPALPDNLPLALLG
RRPDIVSARWGVEAQLKGVDVAKARFYPDVNLNAAFGFSTFGLGKLLNASSQTIQAGPVI
SLPIFDGGRLRANLKGQYAAYESAVANYDSTLNKALGDIADRMSSIRSADKQMVSQRVAQ
DAAQRAYDLAVDRYKAGLTPQLTVLTAESSLLAQEQARVNIDSARRDQQIGLIKALGGGF
DAQAAGLVVGQAPPAKAEDGAMQTH
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcggcctcacctttcctcccgcgtcagcgggtccgctcagcgatttccgccctc
agcctggcggttgtcacgctgggctttgccggttgtgcgaacttcgccggcatccatagc
gacaagcagatcagcacacccgatcagtaccagacccagcgcagcctgccctccgaaggc
ggacaatggccgggcaccgattgggcgcagcgtttcggcgatccgcaactcgtgtccctg
atcgacgaggcgctcgccggcaacccggacctggcgatggccgccgcccgcctgaaggcc
gcgcaagcccagaccgaaggcgccgcggcggccctgctgccctcggtcggttttcagggc
gacgtctaccgcgagaagttcacggagaacaccatctatccaccgggttacggcggcacg
tggttcacccagggcgacctgacggcctcgctgtcgtgggagctcgacctgtggggcaag
aaccgggcggcccgcgcccaggccacttcggccgagcgcgcggaagaggccgaagaccag
gaagtgcggctcgcgctggccaccgccgtggcacgttcttacaaccagctggcgcagcaa
tacgccctgcacgacgtgctcgaacgcgtcgccagacagcgtgagaacctcggcaagctc
acggccgatcgcgtgcgtgcgggcctcgacacgcaggtcgaacagaagcaggccgacagc
aacacggccgacattcagacccagatcgcgcagctcgacggccagatcctgctcacgcgt
caccagttgggcgtgctgctcggcaaagggccggatcgcggcctcgatatctcgcgaccg
acgcttgccaagctgcccacgcccgccctgcccgacaacctgccgctggcgctgctcggc
cgccgcccggacatcgtctcggcccgctggggcgtggaagcccagctcaagggcgtggac
gtggccaaggcccgcttctatcccgacgtcaatctcaacgccgccttcgggttctcgacg
ttcggactgggcaagctgctcaacgccagcagccagaccattcaggccggcccggtcatc
tcgctgccgatcttcgacggcggccggttgcgcgccaatctgaagggccagtacgcggcg
tatgaaagcgccgtcgcgaactacgactcgacgctcaacaaggcgctcggcgacatcgcg
gatcgcatgtcgtcgattcgttccgccgacaagcagatggtgtcgcaacgcgtggcgcag
gacgccgcccagcgcgcctacgatcttgcggtcgatcgctacaaggccggcctcacgccg
cagttgaccgtgctcaccgccgaatcgtcgctgctcgcacaggaacaggcccgcgtgaat
atcgacagcgcgcgccgtgatcagcagatcggcctgatcaaggcactcggcgggggattc
gatgcacaggccgcaggcctcgtcgtgggacaggcgcctccggccaaggccgaggacggc
gccatgcagacgcactga
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