Paenibacillus polymyxa Sb3-1: RE92_22465
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Entry
RE92_22465 CDS
T03812
Name
(GenBank) formate dehydrogenase
KO
K22015
formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:
1.17.98.4
1.17.98.5
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy00680
Methane metabolism
ppoy00720
Other carbon fixation pathways
ppoy01100
Metabolic pathways
ppoy01120
Microbial metabolism in diverse environments
ppoy01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
RE92_22465
00680 Methane metabolism
RE92_22465
Enzymes [BR:
ppoy01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
RE92_22465
1.17.98.5 hydrogen-dependent carbon dioxide reductase
RE92_22465
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
DNA_pol_A
Motif
Other DBs
NCBI-ProteinID:
AJE54136
LinkDB
All DBs
Position
complement(5088175..5090337)
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AA seq
720 aa
AA seq
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MADKVLTVCPYCGSGCQLHLLVDKGQVIGAEPANGRTNEGTLCLKGHYGWDFLNDPQILT
ARLRKPMIRKNGVMEEVEWNEAIQYTAERLSAIKEKYGPDSIMGTGSARGPGNEANYVMQ
KFMRAVIGTNNIDHCARVCHGPSVAGLTYSLGDGAMSNSIPEIEHSDLLFVFGYNAPETH
PIVARRIVAAKQRGAKIIVCDPRMTETGRIADMWLPLKGGSNMALVNAFGHVLVHEGLYD
KRYVEANTEGFAEYVENIKKYTPEYAEGITGVKAADIRAAMREYAKAPTATILYGMGVCQ
FSQAVDVVKGLASLALLTGNLGKPNVGIGPVRGQNNVQGSCDMGALPNVYPGYQDVIDTA
VRKKFEKAWGVELPRKKGYSLTEVPHLILKENKLKAYYIFGEDPVQSDPNAAELREALEK
LEFVVVQDIFMNKTALHADVILPSTAWGEHDGVYSSADRGFQRIRKAVEPQGDVKPDWAI
ISEVATAMGYPMSYANTEEIWDEMRSLSPLFAGASYQKMEEQGGVQWPCPTEDHPGTPYL
YKGNQFSTPSGKGRLFACEWRPPQEQPDAQFPLVLSTVREVGHYSVRTMTGNCRALRQLS
DEPGFIQISPEDGADLNILDGEIVAISSRRGRIMARAQISDRVQKGATYMTYHWWVGACN
ELTADFLDPVSKTPELKYCAIRLERIADQAQAERDVHESYQQIRKQMNVQEAVLADKVTR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaggtattaacagtatgtccttactgcggaagcggttgtcagcttcatttg
ctagtggacaaaggacaggtaattggcgcggagccagctaatggccgtacaaatgaagga
acattgtgtctgaagggacattatgggtgggattttctgaatgatccacagattctgact
gcacgcttgcgcaagcccatgattcgcaaaaatggagtcatggaggaagtggaatggaat
gaagccattcagtatactgccgaacggctgtcagcaattaaggaaaagtatggacctgac
tctatcatggggacgggttccgcacgcggtccggggaatgaagccaattatgtcatgcaa
aagttcatgcgggcagtcattggcaccaataatattgatcactgtgcccgtgtttgccac
ggtccttccgtagcaggcttaacctactcgcttggggatggggctatgtccaactctatt
cctgaaattgaacattctgatctccttttcgtatttggatacaatgcgccagaaacgcat
ccaatcgtcgcaagacgtattgtagctgccaagcaaagaggtgccaaaattattgtatgt
gatcctcgtatgactgaaacagggcgcatcgcggatatgtggctacctctaaaaggcggc
tcgaacatggctttggtgaacgcctttggtcatgtgctagtacatgaagggctgtacgac
aaaagatatgtcgaagcaaacacagaaggctttgccgaatatgtagaaaacattaaaaaa
tatacacctgaatatgcggaaggtattacgggtgtcaaggctgctgacattcgggcggct
atgagggaatatgccaaggctcctaccgctacaattctatacggaatgggcgtatgtcaa
ttttcacaggccgttgatgtggtaaaaggtctcgcttcccttgccctgcttactggtaat
ctgggcaagccaaatgtaggtattggacctgtacgtggacaaaacaatgtccagggctcc
tgcgacatgggtgcattacccaatgtgtatcctggttaccaggatgtcatcgacactgca
gttcgcaaaaagtttgaaaaagcatggggtgttgaactgccgcgtaaaaaaggatattca
cttacagaagtaccgcatctcattctgaaagagaacaagctgaaggcttattatatcttc
ggcgaagatcctgtacaaagtgatccgaacgctgccgagctgcgtgaagcgctggaaaaa
ttggaatttgtcgtggtgcaggatattttcatgaacaagacggcactgcatgcggatgtc
atcctcccttctaccgcttggggcgagcatgacggggtgtattcttcggcagaccgtggc
tttcagcgcatccgcaaggccgtcgagcctcagggtgatgtaaagccagactgggctatt
attagcgaggttgctaccgctatgggctaccctatgtcctatgcaaacacagaggaaatt
tgggatgaaatgcgaagcctcagtcccttattcgctggtgccagctatcagaaaatggag
gaacaaggcggcgtacaatggccatgccctacagaggatcatccaggtacaccgtatttg
tacaaaggcaaccaattttccacacctagtggtaaaggccgattattcgcctgcgaatgg
cgaccaccacaagaacagccggatgcacaattcccgcttgtcttatctacagtacgtgag
gtaggccattactccgtacgtactatgactggtaactgccgtgcattgcgccagttgtct
gatgagcctggatttattcagattagtccggaagacggagcagatctaaacattctagat
ggcgaaattgtggctatctcctcgcgtcggggacgcattatggcacgggcacaaatcagt
gaccgtgtgcagaaaggtgcgacctacatgacctatcactggtgggtcggagcatgtaac
gagttgaccgccgattttctcgacccggtatccaaaaccccggaattaaaatactgtgcc
atccggttggagcggattgccgaccaagcgcaggctgaacgtgatgtacatgaatcatac
caacagattcgtaaacaaatgaacgttcaggaagccgttttagctgacaaggtgacgaga
tga
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