Photobacterium profundum: PBPRB0371
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Entry
PBPRB0371 CDS
T00173
Symbol
VVA1499
Name
(GenBank) putative outer membrane protein TolC
KO
K12340
outer membrane protein
Organism
ppr
Photobacterium profundum
Pathway
ppr01501
beta-Lactam resistance
ppr01503
Cationic antimicrobial peptide (CAMP) resistance
ppr02020
Two-component system
ppr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PBPRB0371 (VVA1499)
09132 Signal transduction
02020 Two-component system
PBPRB0371 (VVA1499)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PBPRB0371 (VVA1499)
01503 Cationic antimicrobial peptide (CAMP) resistance
PBPRB0371 (VVA1499)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppr02000
]
PBPRB0371 (VVA1499)
02044 Secretion system [BR:
ppr02044
]
PBPRB0371 (VVA1499)
01504 Antimicrobial resistance genes [BR:
ppr01504
]
PBPRB0371 (VVA1499)
Transporters [BR:
ppr02000
]
Other transporters
Pores ion channels [TC:
1
]
PBPRB0371 (VVA1499)
Secretion system [BR:
ppr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PBPRB0371 (VVA1499)
RTX toxin transporter
PBPRB0371 (VVA1499)
Multiple protein transporter
PBPRB0371 (VVA1499)
RaxAB-RaxC type I secretion system protein
PBPRB0371 (VVA1499)
Antimicrobial resistance genes [BR:
ppr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
PBPRB0371 (VVA1499)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
PBPRB0371 (VVA1499)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
CAG22244
UniProt:
Q6LKD6
LinkDB
All DBs
Position
2:complement(421279..422577)
Genome browser
AA seq
432 aa
AA seq
DB search
MPKLIQNVFIFPQKSCRIIGCAFLISMATPTYAITIEQAWEASKAFDPSYQKAQIDTQIS
ETNIRSSRSDLLPGLNASATSSWNDDGKNTNSYSVGLSQTIWDSAKWSGLNASEAFYVSS
QLQERQAHNDLAEKLITAYLNLAKANGDLRLAQQKLDEGQKMLTITEQRYAAGSIMITEV
EDMRANHVDEQALILQTRSDIDTLQATLTALINQVPDSINEISTTSLKQPVMQVNSENEW
LALARDNSPELLAALQTLKANQFQYDQAKSGYYPTVAGSINYSDNDRRNSDDLSAGITLN
IPIDLNGSTRASVDRSSLTLNQAKQDIRIVEINIKQTIQSRFNQIQLDWQRVEIAQQQVA
SRERALKSKQTVYDAGLVDATDIITAHNNLFSSKNSLQSLLYQYWQHRVSLLKSVGKLDD
ETIKQISRALAA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagctgatacagaacgtattcatattcccgcaaaagtcttgccgaattataggg
tgtgcatttcttatcagtatggcaacccccacgtacgccattacgattgaacaagcatgg
gaagcttctaaagccttcgatcctagttatcaaaaagcacaaattgatactcaaataagt
gaaacaaatattcgttcaagccgcagtgatttactgccaggcctgaacgcgagtgcgact
tcaagttggaatgatgacggcaagaacaccaatagttattcggtgggtttaagccaaacc
atttgggacagtgctaagtggtcaggcttaaatgcctcagaagctttttatgtgtcttca
caactacaagaacgccaagctcacaacgaccttgccgaaaagttgatcaccgcttacctc
aatttagcgaaagcgaatggggatttacgcttagcgcagcagaaacttgatgaagggcaa
aaaatgctcactatcactgaacaacgctatgctgccggcagtatcatgattaccgaagtg
gaagatatgcgagcgaatcatgttgatgaacaagcgttgattctacaaacccgctctgat
atcgatacattacaagccacgttaaccgctttaatcaatcaagtacccgactcgattaat
gaaatcagtacaacttcgctaaaacaacccgtaatgcaagtgaatagcgagaatgaatgg
ttagcacttgcacgcgataacagccctgagttactggctgccctgcaaacattgaaagct
aaccaattccaatatgaccaagcaaaatccgggtactacccaaccgttgcaggttctatt
aattacagtgataacgaccgccgtaatagtgatgatttaagtgcaggcattacattaaat
attcctattgatttaaatggttcaacacgtgcaagtgtcgatcgttcaagcttaacgctg
aaccaagcaaaacaagatatacgcattgtagaaatcaatataaagcaaaccatccagagt
cgctttaaccagatacagctcgactggcaacgcgtcgaaatagcccaacagcaagtcgca
tcacgtgaaagagccttaaagagtaagcaaaccgtttatgacgcaggtttagtggatgca
accgatattataacggcgcataacaacctattcagcagtaaaaacagcctacagtcattg
ctttatcaatactggcagcatcgtgtttcgctattgaaatcagtaggaaaactggatgat
gaaacaatcaaacaaatatcaagagcacttgcagcatga
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