Pseudodesulfovibrio profundus: DPRO_0248
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Entry
DPRO_0248 CDS
T05258
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DPRO_0248 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprf03400
]
DPRO_0248 (nth)
Enzymes [BR:
pprf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DPRO_0248 (nth)
DNA repair and recombination proteins [BR:
pprf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DPRO_0248 (nth)
Prokaryotic type
DPRO_0248 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
Motif
Other DBs
NCBI-ProteinID:
SOB57127
UniProt:
A0A2C8F4W3
LinkDB
All DBs
Position
DPRO:complement(249986..250621)
Genome browser
AA seq
211 aa
AA seq
DB search
MRKAERAKVIYDRLAKRYPSPEPALDWTNPWELLVATALSAQCTDERVNKVTPVFFERWP
EIKDAAAADVTEIEAVVRSTGFFRNKAKNIKAAANRILDVYNGEVPKSMAELITLGGVAR
KTASIVLSNAFGINEGIAVDTHVKRLAFRLGLTTKTDPNQVEKDLMPLYPKDQWGEINHF
LVFFGREVCPARKPKCDICELNDICPKKGVK
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggcagaacgcgccaaagtaatatatgaccgactggccaaacgttacccttcg
ccggaaccggcactggactggaccaatccatgggaactgctggtagccacagcgctttcc
gcccagtgtaccgatgaacgggtcaacaaggttaccccggtcttttttgaacgctggcct
gaaatcaaggacgcggcagcagccgacgttactgaaatcgaagcagtggtacgatccaca
ggtttttttcgaaacaaggcgaagaacatcaaagcagcggccaaccgcatccttgatgtc
tataacggcgaagtgcccaaaagcatggctgagcttatcacccttggtggtgttgccaga
aagacggccagcatcgtcttgtccaacgcatttggaatcaacgaaggcatcgcggtggac
acccatgtcaaacgacttgcctttcggctgggcctgacaaccaaaacagatcctaaccaa
gtcgaaaaagacctcatgccgctgtaccccaaagatcaatggggtgaaatcaatcatttt
ctggtctttttcggtcgggaagtctgccctgccagaaagcccaagtgtgacatttgcgaa
ctaaacgatatctgcccgaaaaagggagttaaataa
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