Pseudomonas protegens Cab57: PPC_0551
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Entry
PPC_0551 CDS
T03613
Name
(GenBank) TolC family type I secretion outer membrane protein
KO
K12340
outer membrane protein
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro01501
beta-Lactam resistance
ppro01503
Cationic antimicrobial peptide (CAMP) resistance
ppro02020
Two-component system
ppro03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PPC_0551
09132 Signal transduction
02020 Two-component system
PPC_0551
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PPC_0551
01503 Cationic antimicrobial peptide (CAMP) resistance
PPC_0551
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_0551
02044 Secretion system [BR:
ppro02044
]
PPC_0551
01504 Antimicrobial resistance genes [BR:
ppro01504
]
PPC_0551
Transporters [BR:
ppro02000
]
Other transporters
Pores ion channels [TC:
1
]
PPC_0551
Secretion system [BR:
ppro02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PPC_0551
RTX toxin transporter
PPC_0551
Multiple protein transporter
PPC_0551
RaxAB-RaxC type I secretion system protein
PPC_0551
Antimicrobial resistance genes [BR:
ppro01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
PPC_0551
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
PPC_0551
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BAO59898
LinkDB
All DBs
Position
complement(626078..627508)
Genome browser
AA seq
476 aa
AA seq
DB search
MLRKLSLAVAVSCASNGMAWAAEAPLTTKTDLVSIYQEALDNNADLAAARAQYGAQKEVV
PQARAGLLPNLSAGADMNNTRTKFDEPSMTSTRSGNVYQATLAQPLFRADRWFQLQAAKD
INEQASLQLSATEQNLILQSAENYFAVLRAQDNLASTKAEEAAFKRQLDQSNERFDVGLS
DKTDVLQSQASYDTARANRILAQRQVDDAFEALITLTNREYNSIQGIVHTLPVLAPTPND
AKAWVDTAAKQNLNLLASNYAVSAAEETLKQRKAGHAPTLDAVAQYKKGDNDALGFSNPN
PLTRYGSDVEQRSIGLQLNIPIYSGGLTSSQVRESYSRLSQTEQQRESLRRQVVENTRNL
HRAVNTDVEQVQARRQSIISNQSAVEATEIGYQVGTRNIVDVLDAQRQLYTSVRNYNNSR
YDYILDNLRLKQAAGTLNPGDLQDLSRYLKADYNPDRDFLPPDLAKAAQEQLRARP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcaaactctcactggctgttgccgtgtcttgtgcgtccaatggaatggcctgg
gcagcagaagcgcctttgaccaccaagaccgatctggtcagcatctaccaggaagcgctg
gacaacaacgccgatctggccgctgcgcgcgcccagtacggtgcccagaaggaagtggtg
ccccaggctcgtgccgggttgctgcccaacctttcggccggcgcggacatgaacaacacc
cgcaccaagttcgacgaaccgtcgatgacctctacccgcagcggtaacgtctaccaggcg
accctggcccagcccctgttccgggccgaccgctggttccagctgcaggcggccaaggac
atcaacgaacaggcttccctgcaactctcggccaccgagcagaacctgatcctgcagagc
gcagaaaactacttcgcggtgttgcgcgcccaggacaacctggcctcgaccaaggccgag
gaagcggccttcaagcgtcagttggaccaatccaacgaacgcttcgacgtgggcctgtcg
gacaagaccgacgtcctgcaatcccaggccagctacgataccgcccgggccaaccggatc
cttgcccagcgccaggtggatgatgccttcgaggccctgatcaccctgaccaaccgcgag
tacaactcgatccagggcatcgtccataccctgccagtgctggcgccgacccccaacgac
gccaaggcctgggtagacaccgccgccaagcagaacctcaacctgctggccagcaactac
gcagtcagcgccgccgaggaaaccctcaagcagcgcaaggccgggcatgccccgaccctg
gacgcagtggcgcagtacaagaaaggcgacaacgatgctttgggcttcagcaaccccaac
ccgctgacgcgctatggcagcgacgtcgaacagcgctccatcggcctgcaactgaacatt
ccgatctacagcggcggcctgaccagctcccaggtgcgcgaatcctactcgcgcctgagc
cagaccgagcaacagcgtgaatccctgcgccgccaggtggtggaaaacacccgcaacctg
caccgcgcggtgaataccgatgtcgagcaggtccaggcccggcgccagtcgatcatttcc
aaccagagcgcagtggaggccacggagatcggctaccaggtgggcacgcgcaatatcgtc
gatgtgctcgacgcccagcgccagctgtacacctcggtgcgcaactacaacaacagccgc
tacgactacatcctcgacaacctgcgcctgaaacaggctgccggcaccctcaacccggga
gacctgcaggacctgtcgcgctatctcaaggccgactacaacccggatcgcgacttcctg
ccgccagatctggccaaggccgcccaggagcagctcagggcccgcccctga
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