KEGG   Paroceanicella profunda: FDP22_06580
Entry
FDP22_06580       CDS       T06319                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
ppru  Paroceanicella profunda
Pathway
ppru01501  beta-Lactam resistance
ppru01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:ppru00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    FDP22_06580
   01503 Cationic antimicrobial peptide (CAMP) resistance
    FDP22_06580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ppru03036]
    FDP22_06580
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ppru02000]
    FDP22_06580
   01504 Antimicrobial resistance genes [BR:ppru01504]
    FDP22_06580
Chromosome and associated proteins [BR:ppru03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    FDP22_06580
Transporters [BR:ppru02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   FDP22_06580
Antimicrobial resistance genes [BR:ppru01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    FDP22_06580
SSDB
Motif
Pfam: Beta-barrel_RND BSH_RND HH_MFP_RND RND-MFP_C YknX_C HH_EMRA BSH_CzcB BSH_CusB CzcB_C HH_YBHG HH_CzcB Beta-barrel_RND_2 HH_AprE HH_AAEA_pHBA Phage_scaffold OEP
Other DBs
NCBI-ProteinID: QDL91477
UniProt: A0A5B8FGW6
LinkDB
Position
1460002..1461267
AA seq 421 aa
MPTPPAIPAPPAGTRPFHTRRRRQLCVAAFALGVLALAGCREEAAPGAGTAAARPEVGVV
VLHPQSVAITAELPGRTSASLVAEVRPQVGGLIQKRLFREGTEVAEGDALYQIDPKSFEA
AYDAARAALKQAQSQVPSASSRLERYKGLIRQNAVSKQDLDDAEATLESAQASVAAAEAD
VQTAKINLDYTTIRAPISGRIDKSALTPGALVTASQDTALTTIRRLDPINVDIPQSSTNF
LNLRQAVQEGRLRTEGPDVSVSLLLENGTEYPLKGHLEFAEANVDESTGTFILRAEFPNP
DRLLLPGVFVRAVIGEGVADNSFLVPQRAVTRNTKGQPVALFVSAEGKVEQRVVQTGRSV
GNNWLVNTGISDGERVIVDGLQRASDGQQVKAVEVTIDETTGEVIDRKTAETAPAQPGSE
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgccaacgccccctgcgatccccgcgcccccggccgggacccgccctttccacacccgc
cgccgccgccagctttgcgtggcggcgttcgcgttgggggtgctcgccctggcgggctgc
cgggaggaggccgcccccggcgcaggcaccgcggccgcccggccggaggtgggcgtggtg
gtgctgcatccgcaatccgtggccatcaccgccgagctgcccgggcgcaccagcgcctcg
ctggtggccgaggtgcggccccaggtgggcgggctgatccagaagcgcctgttccgcgag
ggcaccgaggtggcggagggcgatgcgctctaccagatcgacccgaagagcttcgaggcc
gcctatgacgccgcccgcgcggcgctgaagcaggcccagtcgcaggtgccctcggcaagc
tccaggctggagcgctacaaggggctgatccgccagaacgccgtgtccaagcaggacctg
gacgatgccgaggccacgctggagtccgcccaggcctccgttgccgccgccgaggcggac
gtgcagaccgcgaagatcaacctcgactacaccaccatccgcgcgccgatctccgggcgg
atcgacaagtccgccctcacccccggcgcgctggtgaccgcgagccaggacaccgcgctc
accaccatccgccggctcgacccgatcaacgtcgacatcccccagtccagcacgaatttc
ctcaacctccgccaggcggttcaggaggggcggttgcgcaccgaagggccggacgtgagc
gtgagcctgttgctggagaacggcaccgaatacccgctgaagggccatctcgaattcgcc
gaggcgaacgtggacgagagcaccggcaccttcatcctgcgcgcggaatttcccaatcct
gacaggctcttgctgcccggcgtcttcgtgcgggcggtcatcggcgagggggtggcggac
aacagtttcctcgtgccccagcgcgcggtgacccgcaacaccaagggccagccggtggcg
ctgttcgtctccgccgagggcaaggtggagcagcgggtggtgcagaccgggcgctccgtg
ggcaacaactggctggtgaacaccggcatctccgatggcgagcgggtgatcgtcgacggc
ttgcagcgcgcctcggacggccagcaggtgaaggccgtggaggtgacgatcgacgagacc
accggcgaggtgatcgaccgcaagaccgccgagaccgccccggcgcagccgggcagcgag
ggctga

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