Paroceanicella profunda: FDP22_06585
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Entry
FDP22_06585 CDS
T06319
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ppru
Paroceanicella profunda
Pathway
ppru01501
beta-Lactam resistance
ppru01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FDP22_06585
01503 Cationic antimicrobial peptide (CAMP) resistance
FDP22_06585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_06585
01504 Antimicrobial resistance genes [BR:
ppru01504
]
FDP22_06585
Transporters [BR:
ppru02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FDP22_06585
Antimicrobial resistance genes [BR:
ppru01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FDP22_06585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QDL91478
UniProt:
A0A5B8FH12
LinkDB
All DBs
Position
1461274..1464408
Genome browser
AA seq
1044 aa
AA seq
DB search
MSRFFINRPIFAWVIAISIMLAGLLALISLSISQYPQIAPPTVRISASYPGADAATVENS
VTKVIEQGMTGIDNLDYMTSTSSGTGQAQLTLTFNNKADPDVAQMQVQNKLQLVESSLPQ
AVTSTGVTVTKSSAGFLMVIAFVSTDGKMNSNDLADYVDSSLNDTIQRVEGVGETRLFGS
GYAMRIWLDPYKLTKYKLMPSDVSAAIEAQNSQVSAGSLGAIPARPGQQLNATVTAGSRL
QTPEQFRNIIVQSNGDGAVVRLNDVATVELGAESYTTSAAYNNQPAAGLAINLATGANAL
DTASAVRKAIEKLSATMPSGVKVVYPYDTTPFVELSIEEVVKTLVEAIVLVFFVMLLFLQ
NWRATLIPTLAVPVVLLGTFGVLSAAGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
EEEGLSPREATVKSMGEITGALVGIAVVLSAVFVPMAFFGGSVGIIYRQFSVTIVSAMVL
SVLVALILTPALCATLLRKPAEHGKTRGFSGWFNRNFERGTRAYQSGTHAVLNRSWRFLV
LFVLMLGATGWLFNRLPSAFLPEEDQGVLIASVTLPAGATQDRTLRTLSAVASYFLEKEP
DAVEGVMYSAGFGFGGSGQNVGTAFIRLKDFALRSDPRLAASAVAGRAMGALSKLRDGRV
FVLSPPAIQGMGNSNGFDFFLQDVGGKGHAALIAARNQLLGLAARDPSLTSTRPNGQEDT
PQFSVDVDQERASALGLAMSDINATLSTAWGSSYIDDFIDRGRVKPVYLQSDAEGRMQPD
DLDKWHVRNADGEMVPFSAFADGSWSVGSPRLERYNGSPAVEIQGAAASGVSSGDAMDRI
DALVGQLPGGFAHEWTGLSYQERLSGDQAMALYGISVLVVFLCLAALYESWTIPLAVMLS
VPIGVLGALAAASLFGQNNDVYFKVGLLTTIGLAAKNAILIVEFAIARLAAGEGMIEATL
EAARQRLRPILMTSIAFILGVTPLAIASGAGSGAQNAIGIGVMGGMIAATVLGVFFVPLL
LVAVLRLFRRRPAPDQAPSAAPAG
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcttcttcatcaaccgtcccatcttcgcatgggtgatcgcgatctcgatcatg
cttgcggggctgctggcgctcatctcgctgtcgatctcgcaatatccgcagatcgcgccg
cccacggtgcggatctcggcctcctatccgggcgcggacgccgccacggtggagaattcg
gtcaccaaggtgatcgagcagggcatgaccgggatcgacaatctcgactacatgacctcg
acctccagtggcaccggccaggcccagctcacgctcaccttcaacaacaaggctgacccg
gacgtggcccagatgcaggtgcagaacaagctgcagctggtcgaatcctcgttgccccag
gcggtgaccagcaccggtgtcacggtcaccaagagctccgccggcttcctgatggtgatc
gccttcgtgtccaccgacgggaagatgaactcgaacgacctcgcggattacgtggacagc
tcgctcaacgacaccatccagcgcgtggagggcgtgggtgagacgcggctgttcggctcc
ggctacgcgatgcgcatctggctcgatccctacaagctcaccaagtacaagctgatgccc
tcggacgtgtccgccgccatcgaggcgcagaacagccaggtgtccgccggcagcctcggc
gccattccggcgcggcccggccagcagctcaacgcaaccgtcactgccggcagccggctg
cagacgcccgagcagttccgcaacatcatcgtgcagagcaacggcgacggcgcggttgtg
cggctgaacgatgtcgccaccgtcgaactgggcgcggagagctacaccacctcggcggcc
tacaacaaccagccggcggccgggcttgccatcaacctcgccaccggggccaacgcgctc
gacaccgcctccgcggtgcgcaaggccatcgaaaagctgagcgccaccatgcccagcggc
gtgaaggtggtctatccctacgacaccacgcccttcgtggaactgtccatcgaggaggtg
gtgaagacgctggtcgaggccatcgtgctggtgttcttcgtgatgctgctcttcctgcag
aactggcgcgccacgctgatccccacgctggcggtgccggtggtgctgctgggcaccttc
ggcgtgctctcggcggcggggtattccatcaacacgctcaccatgttcgccatggtgctg
gccatcggcctgctggtggatgacgccatcgtggtggtggagaacgtggagcgcgtgatg
gaggaggagggcctctccccgcgcgaggccacggtgaagtccatgggggagatcaccggc
gcgctggtcggcattgccgtggtgctctcggcggtgttcgtgccgatggccttcttcggc
ggatcggtgggcatcatctaccggcagttctcggtgacgatcgtctcggcgatggtcctc
tcggtgctggtggcgctcatcctcacgcccgcgctctgcgccacgcttctgcgcaagcca
gcggagcacggcaagacgcgcggcttctccggctggttcaaccgcaatttcgagcgcggc
acccgtgcctaccagagcggcacgcacgcggtgctgaaccgctcctggcgcttcctcgtg
ctcttcgtgctgatgctgggtgccacgggctggctgttcaaccggctgccgagcgccttc
ctgccggaggaggaccagggcgtgctcatcgcctccgtcaccctgccggccggcgccacg
caggaccgcaccctgcgcaccctctccgccgtggcgagctatttcctggagaaggagccg
gacgcggtggagggcgtgatgtattccgccggcttcggcttcggcggctcggggcagaac
gtgggcaccgccttcatccgcctgaaggatttcgccctgcgcagcgacccgcgcctcgcc
gcctccgccgtggcgggccgggcgatgggcgcgctgtcgaagctgcgcgacgggcgggtg
ttcgtgctctcgccgcccgcgatccagggcatgggcaactcgaacggcttcgatttcttc
ctgcaggacgtgggcgggaagggccatgccgcgctgatcgcggcgcgcaaccagctcctc
ggcctcgcggcccgggacccgtcgctgaccagcacccgcccgaacggccaggaggatacg
ccgcaattctccgtcgacgtggaccaggagcgcgccagcgccctcggcctcgcgatgtcg
gacatcaacgccacgctctccaccgcctggggcagctcttacatcgatgatttcatcgac
cgcggccgggtgaagccggtctacctgcagtccgatgccgaggggcggatgcagcccgac
gacctcgacaaatggcacgtgcgcaacgcggatggcgagatggtgcccttctccgccttc
gcggacggaagctggtccgtcggctcgccgcggctggaacgctacaacggctccccggcc
gtcgagatccagggcgcggcggcaagcggcgtgagctcgggcgacgcgatggaccggatc
gacgcgctggtgggccagcttcccggcggcttcgcccatgagtggaccgggctctcctat
caggagcgcctctcgggcgaccaggctatggcgctctacggcatctcggtgctggtggtg
ttcctctgcctcgccgcgctctacgagagctggaccatcccgctcgcggtgatgctgtcg
gtgccgatcggcgtgctgggagcgcttgcggccgccagtctcttcggtcagaacaacgat
gtgtatttcaaggtggggcttctgacgaccatcggtctcgcagccaagaacgccatcctc
atcgtggaattcgccatcgcgcggctggcggccggggaagggatgatcgaggcgacgctg
gaggccgcacggcagcggctccggcccatcctgatgacttcgatcgccttcatcctcggc
gtcacgccgctcgccattgccagcggagcaggctccggtgcgcagaacgccatcgggatc
ggggtcatgggcggcatgatcgcggccacggttctcggcgtgttcttcgtgcccctgctc
ctcgtcgcggtgctgcgcctgttccggcgccgcccggcccccgaccaggccccgagcgcg
gcgccggccggttga
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integrated database retrieval system
