Paroceanicella profunda: FDP22_06875
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Entry
FDP22_06875 CDS
T06319
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ppru
Paroceanicella profunda
Pathway
ppru01501
beta-Lactam resistance
ppru01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FDP22_06875
01503 Cationic antimicrobial peptide (CAMP) resistance
FDP22_06875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppru03036
]
FDP22_06875
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_06875
01504 Antimicrobial resistance genes [BR:
ppru01504
]
FDP22_06875
Chromosome and associated proteins [BR:
ppru03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FDP22_06875
Transporters [BR:
ppru02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FDP22_06875
Antimicrobial resistance genes [BR:
ppru01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FDP22_06875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
ORF_12_N
Motif
Other DBs
NCBI-ProteinID:
QDL91528
UniProt:
A0A5B8FH26
LinkDB
All DBs
Position
complement(1520166..1521287)
Genome browser
AA seq
373 aa
AA seq
DB search
MGMVRQAIISIVVLGAAGAGIAAFSPDARDLLARVGIDTSPLALTATQEPAATGRADRAV
GVITATAETARAATRLRLIGSGRALRSVTLFARSTGEVEELGFTSGEKVARGTILARLDS
DAEEIAVDRAKVAEAEADAAFERLTALAARRIATQVDLDEADRTRQRAQLDLRTAELALE
RRLVRAPFDGVVGLSEVDVGDLIGADTAIAVLDDRSKLEIDLYAPERFAALIGLGQTLIA
TTPATPGAVFNGTVTAIDSQVDSESRTLRLRAAIDNSDDMLRPGFSFNVVMSFPGESHVA
VPALAVQWRADGPFVWTVTDGKAAQVSVEVLEREDDRVLLSGIDAGQVVVTEGVQKLRPG
STVTEVTTPPDAG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgggcatggtccgacaggccatcatatcgatcgtcgtgcttggcgcggccggcgcgggc
attgccgcgttcagcccggacgcgcgcgacctgctcgcccgcgtcggcatcgacacctct
ccgctcgcgctcaccgccacgcaggagcccgccgccaccggccgggcggaccgcgcggtg
ggcgtgatcaccgccacggccgagaccgcccgcgccgccacgcgcctgcgcctcatcggc
tcgggccgggcgctgcgcagcgtcacgctgttcgcccgctccaccggcgaggtggaggaa
ctgggcttcacctccggcgagaaggtcgcccggggcaccatcctcgcgcggctggacagc
gatgccgaggagatcgccgtggatcgggccaaggtggccgaggccgaggcggatgccgcc
ttcgagcgcctgaccgcgctcgccgcccgccgcatcgcaacccaggtcgacctcgacgag
gccgaccgcacccgccagcgcgcccagcttgacctgcgcaccgccgaactggcgctggag
cgccggctggtgcgcgcgcccttcgacggcgtggtgggcctctcggaggtggacgtgggc
gacctgatcggcgccgacaccgccatcgccgtgctcgacgaccgctcgaagctggagatc
gacctctacgcgccggaacgtttcgcggcgctgatcgggctggggcagacgctcatcgcc
accacccccgccaccccgggcgcggtattcaacggcaccgtcaccgccatcgacagccag
gtcgacagcgagagccgcaccctgcgcctgcgcgcggccatcgacaattccgacgacatg
ctgcgccccggcttctccttcaacgtggtgatgtccttccccggggaatcgcacgtggcg
gtgccggcgctggcggtgcagtggcgcgcggacgggcccttcgtctggacggtgaccgat
ggcaaggcggcgcaggtctccgtggaggtgctggagcgcgaggatgaccgggtgctgctc
tccggcatcgacgccggccaggtggtggtgaccgagggcgtgcagaaactgcggccgggg
agcaccgtcaccgaagtgacgacgcccccggacgccggctga
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