Paroceanicella profunda: FDP22_21030
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Entry
FDP22_21030 CDS
T06319
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ppru
Paroceanicella profunda
Pathway
ppru01501
beta-Lactam resistance
ppru01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FDP22_21030
01503 Cationic antimicrobial peptide (CAMP) resistance
FDP22_21030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppru03036
]
FDP22_21030
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_21030
01504 Antimicrobial resistance genes [BR:
ppru01504
]
FDP22_21030
Chromosome and associated proteins [BR:
ppru03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FDP22_21030
Transporters [BR:
ppru02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FDP22_21030
Antimicrobial resistance genes [BR:
ppru01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FDP22_21030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
FlgT_C
Motif
Other DBs
NCBI-ProteinID:
QDL94359
UniProt:
A0A5B8G4I8
LinkDB
All DBs
Position
pD4M1B:70097..71221
Genome browser
AA seq
374 aa
AA seq
DB search
MRHTSAIFGLVLSASSLSLLADTSQAQAPAAAPAVSVTVVAAERQDVSRSLDVVGRIEAQ
ERVELRARVTGFLEAVLFEDGATVKAGDVLYHIEKDEFAAAVTQAEGTLQQDQAALKLAQ
VQLDRATALADRDTGTIARRDEAQAAADEAAGRITSDQAALARARINLGYTDITAPISGR
IGRTAVTQGNVVGPDSGVLTTIVTQDPIYVTFPISQRVLRAYQVAGGDASAAASAAIDVK
IAFSDGTTYDQSGTLDFIDVSVSRSTDTVIARAVMPNPDLVLRDGELITVTLSEKTPEEK
IVIPQAALLSDRDGLYVFTVTDGKADRARVKTGPQHGTGVVIEDGLAEGDQVVIDGIEKL
QPGVAVVAAPAGKS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcgccacacttccgccatatttggccttgttctttccgcctcttcgctctctctcctt
gccgatacatcgcaagcccaggcgccggccgccgccccggcggtttcagtgacagtggtg
gcggcggaaagacaggacgtgtcacgctcgctggacgtggtgggccggatcgaggcgcag
gagcgcgtggaactgcgtgcccgggtgaccggctttctcgaggcggtgctgttcgaggac
ggcgccacggtgaaggccggagacgtgctctaccacatcgagaaggacgagttcgccgcc
gcggtcacccaggccgagggcacgctgcagcaggaccaggcggcgctgaagctcgcgcag
gttcagctcgaccgcgccaccgccctggccgaccgcgacaccggcaccatcgcccggcgc
gacgaggcccaggccgccgccgacgaggccgccggccgcatcacctccgaccaggccgcc
ctggcccgggcccggatcaacctcggctacaccgacatcaccgccccgatctccggccgc
atcggccgcaccgcggtgacgcagggcaacgtggtgggcccggacagcggcgtgctcacc
accatcgtcacgcaggacccgatctacgtcaccttcccgatcagccagcgcgtgctgcgc
gcctatcaggtggccggcggcgatgcctccgccgccgccagcgcggccatagacgtgaag
atcgccttctccgacggcaccacctatgaccagagcggcacgctggacttcatcgacgtc
tccgtctcccgctccaccgacaccgtgatcgcccgggcggtgatgccgaaccccgatctc
gtgctgcgcgacggcgagctgatcaccgtcaccctctcggagaagaccccggaggagaag
atcgtgatcccgcaggcggccctgctctcggacagggacgggctctacgtcttcaccgtc
accgacggaaaggcggaccgcgcccgggtgaagaccggcccccagcacggcaccggcgtc
gtcatcgaggacgggctcgcggagggcgaccaggtggtgatcgacggcatcgagaagctg
caacccggcgtcgccgtggtcgccgccccggccggaaagtcctga
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