KEGG   Paroceanicella profunda: FDP22_23540
Entry
FDP22_23540       CDS       T06319                                 
Name
(GenBank) type VI secretion protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
ppru  Paroceanicella profunda
Pathway
ppru03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppru00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FDP22_23540
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppru02044]
    FDP22_23540
Enzymes [BR:ppru01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     FDP22_23540
Secretion system [BR:ppru02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   FDP22_23540
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind DEAD
Other DBs
NCBI-ProteinID: QDL94900
UniProt: A0A5B8G4E5
LinkDB
Position
pD4M1E:complement(40578..42587)
AA seq 669 aa
MGKARIATGVLLVTLVTAAMGYTIASAVLTYQDLGFGAEIDFAYIAQNYLAILDRRPEDA
QLIHLIIGSFAAAGLMLSLALSGSALTRFGQTHWQSAREMKANGFFGAPGTGFILGKLGP
PGSRAKYICSKVFPHALIVAPTGRGKTTGFVIPNLLTWQGSAVTLDVKGECFEATARHRA
AQGDKVYRFAPTDWEGKRTHRYNPLLRIYQLKDPARQQMELQLLATLFLQSDNDRVQGLL
KGGIDLFVAAGLLAFQRKRPTLGEIYRIAASGGNKQKEYFARGHEVDNRAAKLIFTRLAS
TNNDTLTSYVSLLMTSGLDQWQNPAIDEATSVSDFDFRTIRKKPFSVYLVVQPLMVKPLA
PLIRLFFSDLLSAMQEKDPGPDEPWPVMIMLDEFNRLGKMPIVVESIETLRTYRGHLAVV
TQTIPALDEIYGENTRRALQGNAGVKLYLTPSDEKTVEELSKAVGKTTKTVITRSQSIGK
NPFEGRSQSTRTEESSLLPEDEARRLPLDEIVMVIDAQMPVRAKRIQYFDDRLFKAIHAA
QTGELPFPKPGGGRAQGTLPLSVRAMPMTPPSTGGGHGAETDVVVESARQVAAGQPSGQA
DAAPKKTAPVVQAVIAEEQRQMEMDFGSGVVDSEAASVADEAQMRSAVDGLDEMEAMLRE
EDGERLVAR
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgggaaaggcgcggatcgcgaccggtgtcttgttggtaacgctggtgaccgccgccatg
ggctataccatcgcctcggcggtgctgacctaccaggatctcggcttcggggccgagatc
gactttgcctatatcgcgcagaactatctggcgatcctggaccgccgcccggaggatgcg
caacttattcacctgatcatcggcagcttcgccgccgccggcctgatgctgagcctggcg
ctgtcgggatccgccctgacacgctttggccagacccattggcagagcgcgcgcgagatg
aaggccaatggcttcttcggggcgccagggaccgggttcatcctcggcaagctggggcct
ccgggctcccgcgcaaaatacatttgctccaaggttttcccgcatgcgctgatcgtggcc
cccacgggccgcggcaagaccacgggctttgtcattccgaacctgctcacctggcaaggc
tccgccgtgacgctcgatgtgaagggcgagtgtttcgaggccacggcccggcaccgcgca
gcccaaggcgacaaggtctatcgctttgcccccaccgattgggagggcaagcgcacgcat
cgctacaacccgctcctgcgcatctatcaactgaaagatcccgcgcgccagcagatggaa
ttgcagctcctggcgacgctcttcctgcagagtgacaacgaccgggtgcaggggctgctc
aagggcgggatcgatctcttcgtggcggcaggcctgttggccttccagcgcaagcgtccg
accctgggcgagatctaccgcatcgccgcctcgggcgggaacaagcagaaggagtatttc
gcgcggggccatgaggtcgacaacagggcggccaagctgatcttcacgcggctggcctcg
accaacaatgacaccctgacctcttacgtctcgctcctgatgacatcggggctcgaccaa
tggcagaacccggcgatcgatgaggcgacgtccgtgtcggactttgatttccggacgatc
cgcaagaaacccttttcggtctatctcgtggtccagccgctgatggtgaagccgctcgcg
ccgctgatccggctgtttttctccgacctgctctcggccatgcaggaaaaggaccccggg
ccggatgagccgtggccggtgatgatcatgctcgacgagttcaatcgcctcggcaaaatg
cccatcgtggtcgaaagcatcgagacactgcgcacctatcgtggtcacctcgccgttgtc
acccaaaccatccccgccctcgatgaaatctacggcgaaaacacccgccgcgccttgcag
gggaatgcgggcgtgaagctctacctgacgccttcggatgaaaagacagtcgaggaactg
agcaaggcggttggcaagaccacgaagaccgtcatcacgcgatcccagtcaatcggcaaa
aacccctttgaaggccgcagccaatccacgcggactgaagaaagctccttgctccctgaa
gacgaggcgcgccgcctgccgctcgatgagatcgtcatggtcatcgatgcccagatgccg
gtccgggcaaagcggatccaatattttgacgatcggctgttcaaggcgatccacgcggcg
cagacgggagagttgccgtttcccaagccggggggaggcagggcccaaggcacgctgccg
ctgagtgtgcgagccatgccgatgacaccgccttcgacgggtggaggacacggagctgaa
actgacgtagttgtggagagcgcacgccaggttgcagccggtcaaccgtcaggccaagcc
gacgccgctccaaagaagaccgcgcctgtcgttcaagccgtcatcgccgaggaacagcgc
cagatggagatggattttggcagcggcgtcgtggattctgaagctgcgagcgtagctgat
gaggcgcagatgcgctctgcagtcgatggcttggacgaaatggaagcgatgctgcgagag
gaggatggtgaaaggctggttgcgcgatag

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