Pseudomonas psychrophila: G5J76_20045
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Entry
G5J76_20045 CDS
T06988
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh01501
beta-Lactam resistance
ppsh02024
Quorum sensing
Module
ppsh_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5J76_20045
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
G5J76_20045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsh02000
]
G5J76_20045
01504 Antimicrobial resistance genes [BR:
ppsh01504
]
G5J76_20045
Transporters [BR:
ppsh02000
]
Other transporters
Pores ion channels [TC:
1
]
G5J76_20045
Antimicrobial resistance genes [BR:
ppsh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
G5J76_20045
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
G5J76_20045
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
G5J76_20045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
P22_Tail-4
Motif
Other DBs
NCBI-ProteinID:
QIE34419
LinkDB
All DBs
Position
complement(4441686..4443161)
Genome browser
AA seq
491 aa
AA seq
DB search
MSHKTLRTGLSLVFTSMVLAGCASYSGLNTVGVSEEAKNLKAAQSLNGVTVTPAAWPEKD
WWKRLGDVQLDGLIQEALRDSPDMQIASARAHQATAAAGAANAARMPTLDAEADVSRSRL
SRSQDPSGQGGRYDTLRDASLTFNYTFDLWGGQRDAWEAALGEARAAEVDSRAASLTLAA
DVARGYSSLGHAFIVRDLAKDDLERTGKLLDLSKRRLQAGIDSHYQFQQTESLEASSQEQ
LISAEKQLKSARIALAVLLGKGPDRGIDIARPKILAPSAVALPSALPAELLGRRPDLVAA
RWRVEAASKNIAAAKTRFYPNLNLSAAAGTQSLLGDALFGSASRFLTIAPAISLPIFDGG
RLRAGLDSEDAKYDLAVAQYNKILVGALGDVSDTLVQLGAVGQQINAQQRATDIAQDSFN
TVLQRYGSGVGNYLDVLSIEQQLLQAQRQLADLNAEQIDLSIQLMQALGGGFEPGNTAEA
VPSQVLVGRII
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagccacaaaacgctgcgtacaggccttagcctggtatttacgtcgatggtgttggcc
ggttgcgccagctatagcggcttaaacaccgtgggcgtgagtgaggaagcgaaaaacctc
aaggctgctcaatcgctcaatggcgtcacggttaccccggcagcctggcctgaaaaagac
tggtggaagcgtctgggggacgttcagctggacggcttgattcaggaagccttgcgcgac
agcccggacatgcaaatagccagcgcccgtgcgcatcaggcgactgccgcggccggtgcg
gccaatgccgcacgtatgccgacgctggatgccgaagccgatgtctcgcgttcacgcctg
tcgcgctctcaagatccgagtgggcagggcggtcgatacgacaccctgcgtgatgccagt
ctgacgtttaattacacgttcgatttgtggggcggtcagcgtgacgcctgggaagcagcg
ttgggcgaggcccgtgcggccgaagttgacagccgggccgcgagcctgaccctggccgcc
gatgtagcccggggttacagcagccttgggcatgcctttatcgtccgtgacttggccaag
gatgacctggaacgtaccgggaaattgctcgacctgagcaagcgtcgtctgcaagccggc
atcgacagccattaccagtttcagcaaaccgaaagcctcgaggccagttctcaagagcag
ttgatcagcgctgaaaaacaactcaaaagcgcgcgcatcgcgctggcggtgttgttaggc
aaggggccggatcgcggcattgatatcgcgcgtccgaaaattctggcgccgagcgctgtg
gcgttgccaagtgccctgcctgctgagttgctgggtcgtcgtccggatctggtggcggcg
cgctggcgagtggaggcggcgagcaagaatattgctgcggccaagacgcgcttttatccc
aatctcaacttgagtgcggcggcaggtactcagtcgctgttgggtgatgcgttgttcggg
tctgccagtcgcttcctcactatcgcaccggccatttcgctgccgatctttgatggtggc
cgcctgcgtgcagggctggatagcgaggacgccaagtacgatctggctgtcgcgcagtac
aacaagatattggtgggcgccctgggcgatgtcagtgacaccctcgttcagctaggtgcc
gttgggcagcaaatcaacgcccagcaacgggcaaccgatatcgcccaggactcgttcaac
accgtgttgcagcgctatggctcgggtgtcggtaactacctggacgtgctcagcattgag
cagcaattgcttcaggcccagcgccagctggcggacctgaatgccgagcagatcgatctt
tcgatccaattgatgcaagccctgggcggtggatttgagcccggcaatacggctgaagcc
gttccctctcaagtcctcgtcggcagaataatttag
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