Pseudomonas psychrophila: G5J76_22295
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Entry
G5J76_22295 CDS
T06988
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh01501
beta-Lactam resistance
ppsh02024
Quorum sensing
Module
ppsh_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5J76_22295
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
G5J76_22295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsh02000
]
G5J76_22295
01504 Antimicrobial resistance genes [BR:
ppsh01504
]
G5J76_22295
Transporters [BR:
ppsh02000
]
Other transporters
Pores ion channels [TC:
1
]
G5J76_22295
Antimicrobial resistance genes [BR:
ppsh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
G5J76_22295
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
G5J76_22295
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
G5J76_22295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QIE34838
LinkDB
All DBs
Position
complement(4936000..4937511)
Genome browser
AA seq
503 aa
AA seq
DB search
MQRRISRELKALSVLALSLALNGCIGFGGIAPKGTMLPANALATDEAIQSAAKDADWPKA
QWWHAYGDPQLDHWISLAVQGSPTMAMAAARVRQARAMAGVAESAESLQIKGESTLKRHN
WPSDQFYGPGALDNSTTWDNNAALGFSFALDLWGRESNATEQALDMAHMSAAEARQAQLE
LQNNVIRAYIQLSLHYAQLDIIESTLHQQEQILDLAQKRLDGGIGTHFEVSQAQAPLPEI
HRQIDAREEEIALTRNQLAALAGKGPGEGARLTRPTLALGTALKLPSALPAQLLGQRPDV
VASRWEVAAQARGIDVAHAGFYPNVDLVGSIGFMATGGSALGFLTGKKLNYNVGPAISLP
IFDGGRLRSELGVASGGYDMAVAKYNQTLVTALKNISDQLIKRESMEKQQVFAAESVQAA
QKTYDIAMVAFQRGLTDYLNVLNAQTLLFKQQQIEQQVQAARLSAHAELVTALGGGLGAG
SDVPKDDRYAPDKPPAVMALFNH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgtcgcatcagcagagagcttaaagccctcagtgttctggctttatcgttagca
ttaaatggctgcatcggttttggtggtattgcgcccaagggcacgatgttgccagccaat
gctctggccaccgacgaggcgattcaaagcgccgcgaaagacgcagactggcccaaagcc
caatggtggcacgcttacggcgacccgcaactggatcactggatcagtctggctgttcag
ggtagcccaaccatggcaatggccgcggcccgagtgcgtcaggccagggcgatggcgggg
gttgccgagtcggctgaatcattgcaaatcaaaggtgagtcgacccttaagcggcacaac
tggccatcggaccaattctatggcccgggcgcgctggacaactccacgacctgggacaac
aacgcagcactgggcttcagctttgcgctggacctgtggggccgcgaaagcaatgccacc
gaacaggcactggacatggcgcacatgagtgcagccgaggcgcgccaagcccagctcgaa
ctgcagaacaatgtgattcgcgcctatatccagttgtccctgcactacgcccagctcgac
atcatcgaatcgaccttgcatcagcaagaacagatcctcgatctggcgcaaaagcgcctg
gacggcggcatcggcacacactttgaggtcagccaggcacaagcgccgctgcccgagatc
catcgccagatcgacgcccgggaagaagaaatcgccctgacccgcaaccaattggcggcg
ctggccggtaaaggcccgggcgagggcgcacggctgacgcggccgaccctggcattgggg
accgcactcaaactgccatcggccttgcccgcgcaactgttggggcagcgtcccgacgtg
gtcgccagtcgttgggaagtggcggcgcaggcccgaggcatcgatgtcgcccatgccggt
ttctaccccaatgtcgatctcgttggcagcattggctttatggccaccggtggtagcgcg
ctgggctttttgaccggcaagaagctcaattacaacgtcggcccggcaatctcgctgccg
atttttgatggcggtcgcctgcgctccgaactgggcgtggcgtccggtggttatgacatg
gccgtggccaagtacaaccagacgctggtgacggcgctcaagaacatttccgatcagttg
atcaagcgcgagtcgatggaaaagcagcaggtgttcgccgccgaatcggttcaagcggct
cagaaaacctacgacatcgccatggtcgcgttccagcgtgggctgaccgactacctcaac
gtactgaatgcacaaactctgctgttcaagcagcagcagattgagcagcaagtccaggct
gcccgcctgagtgcccatgccgagctggtaacagcgctgggtggcggtcttggggctggt
tctgatgtgcccaaggatgatcgctatgcccctgacaaacccccggccgtcatggcgctg
ttcaatcactaa
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