Pseudomonas oryzihabitans PRS08-11306: BJP27_22170
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Entry
BJP27_22170 CDS
T05074
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl01501
beta-Lactam resistance
ppsl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BJP27_22170
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BJP27_22170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsl02000
]
BJP27_22170
01504 Antimicrobial resistance genes [BR:
ppsl01504
]
BJP27_22170
Transporters [BR:
ppsl02000
]
Other transporters
Pores ion channels [TC:
1
]
BJP27_22170
Antimicrobial resistance genes [BR:
ppsl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BJP27_22170
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BJP27_22170
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BJP27_22170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF2563
Motif
Other DBs
NCBI-ProteinID:
APQ14070
LinkDB
All DBs
Position
complement(4924007..4925446)
Genome browser
AA seq
479 aa
AA seq
DB search
MPALRALPPLLLLALLAGCTVGPDYQRPSAPLSTQFKEAAGWKAASPRDDQAKGAWWQAY
EDPQLAALLGQVAVSNQNVAQYQALYRQARALVRESRAETLPSATLDAKATRSENASSAS
GSSSTTAGGATVRNAESLSLGLSWDLDLWGKLRRTLEEDRASAQASAAELANATLSAQAE
LAQDYFQLRILDRRLALFDQTLADYRRYLAVIQNRYDEQLASRADLAQARTQLDSAEADR
LALTTQRAQLEHAIALLLGKPPADFSLAVDPHWQARLPDIPAGLPTALLERRPDIAQAER
QVAAANAAIGVATAAYYPDLTLSASGGYQSSLLGELFKTPSRFWSLGPTLSGTLFDFGAT
RAGVDQARAAYDAKVASYRQTVLTALGEVEDYLVALHTLDPEIAAQRRAVAAARDSASVT
RDQYEAGMIDYLDVATTQATQLSQEQSLLQLESSQLVTSVQLQMALGGDWQATRLADEP
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccctacgcgccctacccccgctgctcctgctggccctgctcgccggctgcacc
gtcggacctgattaccaaaggcccagcgccccgctctcgacgcaattcaaggaggccgcc
ggctggaaggccgccagtccgcgcgacgaccaggccaagggcgcctggtggcaagcctac
gaagatccccagctcgcggccctgctgggccaggtggcggtctccaaccagaacgtcgcc
caataccaggcgctctatcgccaggcccgcgccctggtgcgcgagagccgcgccgagacc
ctgcccagcgccaccctggacgccaaggcgacccgcagcgagaacgccagcagtgccagc
ggctccagcagtaccacggcggggggcgccacggtcaggaacgccgagagcctgagcctc
ggcctgagctgggacctcgacctctggggcaagctgcgccgcaccctggaagaagaccgc
gccagtgcccaggccagcgccgcggagctggccaatgccaccctcagtgcccaggccgag
ttggcccaggactacttccaactgcgcatcctggatcggcgcctggcgctcttcgaccag
accctggccgactaccggcgctacctggcggtgatccagaaccgctacgacgaacagctc
gcctcccgcgccgacctcgcccaggcgcgtacccaactggacagcgccgaagccgaccga
ctggccctgaccacccagcgcgcccagctggagcacgccatcgccctgctgctcggcaag
ccgccagcggacttcagcctggccgttgatccgcactggcaggcgcggctgccggacatc
cccgccggcctacccaccgccttactggagcgccgccccgacatcgcccaggccgagcgg
caggtggcggcggccaacgccgccatcggcgtggccaccgccgcctactacccggacctg
accctgagcgccagcggcggctaccagagcagcctgctcggcgagctgttcaagaccccc
agtcgcttctggtccctaggtccgaccctttccggcaccctgttcgacttcggcgccacc
cgcgccggcgtcgatcaggcccgcgccgcctacgacgccaaggtcgccagctaccggcag
acggtgctcaccgccctcggcgaagtggaggattacctggtggccctgcatacccttgac
cccgagattgccgcccagcgccgggccgtggccgccgcccgcgactcggccagtgtgacc
cgcgaccaatacgaggccggcatgatcgactacctggacgtggccaccacccaggccacc
cagctcagccaggagcagagcctgctgcagctggaatccagccagttggtgaccagtgtc
cagctgcagatggccctgggcggcgactggcaggccacgcgcctggccgacgagccctga
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