Podarcis raffonei (Aeolian wall lizard): 128404468
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Entry
128404468 CDS
T09310
Symbol
ADAR
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase isoform X1
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04622
RIG-I-like receptor signaling pathway
praf04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128404468 (ADAR)
04623 Cytosolic DNA-sensing pathway
128404468 (ADAR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
praf03041
]
128404468 (ADAR)
Enzymes [BR:
praf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
128404468 (ADAR)
Spliceosome [BR:
praf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128404468 (ADAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
HTH_9
HTH_20
Motif
Other DBs
NCBI-GeneID:
128404468
NCBI-ProteinID:
XP_053226116
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All DBs
Position
16:complement(8765868..8808954)
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AA seq
1189 aa
AA seq
DB search
MSRGVTRGRGSDQVPPKHSGLSNPAFFNGPLVPQGGEDFRQRQVLFLNGQLAEAPLWQPR
AQRPQLYQGNRRGPGTFSPPQSSQHSSWGAARRLPCNSSWQEQKQAPQPPRPRYSGNSRR
EVEGLITDLRHLTLSGQGVEQRLLEILGQLRPGEAESARCLARKLEVQKKEVNHHLYRLL
TRGQLCKIGEHPPLWRLADSPRPQGALREGNSAGQRGQGRFPVPGGGGGGEEESSASDPE
DCPDSAAMAEVREKICNYLFSVADSTAHDLAKNIGLSKARNVNSTLLSLEKLGEVCKENA
NPPKWSLTDNKRKRMQNKQKAEEVREMAAPAPKPDPEPPTPCAEPELPASLPAPPLPSPS
PPPPPPPPPPLLESEEENVENGQQVSSEPAEQGDACSPRAAAPPPRKRPRYHWFPNYDNF
ENGKWATDDIPEDLNAINNQDEESRCIMESPLSPSYAAQFDTAFLCTPLEKLMACQKKNP
VSGLIEYTQYTYQHCEFVLLKQSGPSHEPRFKFQAVIDGRRFPPAEAGSKKLAKQEAAAH
AMKILLREVEHEGEDGMEPEKSLYEDSSLSEAELPEQTESEALSTTQQMNVLSGKNPVSA
LMEYAQKSGSVCEFQLLSQDGPPHDPKFKYCVKVGERVFPAVVSNSKKGAKQMAAEAAMR
GLTGDTSTLPEQTEAQGDQPADVPGVQPATVEEAKAASAKGVGELIKYLNSNPVSGLLEY
ARANGFAAEFKLINQTGPPHDPKFVFQAKVGGRWFPAVTAHSKKQGKQEAADAALRVLIG
ETEKAENSEGLTITELPVSGSTLHDQIAMLSHQRFNTLTARIQHSLLGRKILAAIIMRRG
QEGLGVVVSIGTGNRCVKGEELSLKGETVNDCHAEIISRRGFIRFLYTELMKFDPSAPED
SIFQPLEDGKLKIKDDITFHLYISTAPCGDGALFDKSCTDQANTVGEGQHQPLFENPKQG
KLRTKVENGEGTIPVESSDIVPTWDGIQHGERLRTMSCSDKILRWNVLGLQGALLSHFLQ
PVYLRSVTLGYLYSQGHLTRAICCRMSRDGNTFQSGLPEPYFVNHPEVGRVSVYDSARQT
GKTKESSVNWCLPDDSEVEVLDGTKGKVDGPKLDVSRVSKRNLFALFQSLCAKMDRKALQ
KLTVYSEAKEAAVTYQSAKRQFFWALQEMGYGSWICKPQEEKTFGPSEV
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggtgtcactcgaggcagaggttcagatcaggtgcccccaaaacatagcggc
ctctctaacccagctttctttaacggtcctcttgtcccgcagggaggcgaggattttcgg
cagcggcaggtcctcttcctaaacgggcagctcgccgaagccccgctgtggcagccccgg
gcgcagcgaccccaactgtaccagggcaaccgccgaggtccaggcaccttctcacctccc
cagagctcccagcacagcagttggggcgcagccaggaggcttccctgcaacagtagctgg
caggagcagaagcaggctccccagccccctcggccgaggtacagcggcaattcaaggagg
gaagttgaagggctcatcacagacttacggcacctgacgctctccggccaaggagttgaa
cagcggctcttggagatcttggggcagctccgacctggggaggccgaatctgcccgctgc
cttgcccgtaaactcgaagtacagaagaaggaggtcaatcatcacctctacaggcttctt
acgcgagggcagttgtgcaaaataggggagcaccctccgttgtggaggttagcagacagc
cctaggccccagggagcgttgagagaagggaactccgctggccagaggggccagggccga
ttcccagttcctgggggaggaggaggaggagaagaagagagctctgcctctgacccagag
gactgtcccgattccgccgccatggccgaggtcagggagaagatctgcaactacctgttc
agcgtcgcggactcgacggcgcatgaccttgccaaaaacatcggcctctccaaggcccgg
aacgtcaactccaccctgctgtccttggagaagctgggggaggtgtgcaaggagaacgcc
aacccccccaagtggtccctcactgacaacaagcgcaagaggatgcagaacaagcagaag
gcggaagaggtcagggaaatggctgcccctgctccaaaaccggaccccgagcctccgacc
ccgtgcgcggaaccggagctgcccgccagcttgccagctcctcctcttccttccccttcc
ccgcctcctcctccaccgccgccgccgccgcttctagagagtgaggaggagaacgttgag
aacgggcagcaggtgtcgtcggagccagcggagcagggagacgcttgctctccccgggcg
gcggccccccctcctcggaagcggccccggtaccactggttccccaactacgacaacttc
gagaacggcaagtgggccaccgacgacatcccggaggacctgaatgccatcaacaaccag
gacgaggagtcccggtgcatcatggagtccccgctctcccccagctacgcggcccagttc
gacacggccttcctgtgcactcccttggagaagctcatggcgtgccagaagaagaacccc
gtcagtggcttgatcgaatacacccagtacacgtaccagcattgcgagttcgtcctgctg
aagcagagcgggccgtcacacgagccacggtttaaattccaggcggtgatcgacggtcgc
cggttcccgccagcggaagcaggcagcaagaagttggccaaacaggaagcggccgcccac
gccatgaagatcctcttgcgcgaagtcgagcacgaaggggaggacggcatggagccggag
aaatccttgtatgaggacagttctctcagcgaagcagaactgcctgagcagacagagtca
gaggctttgtctacaacgcaacagatgaacgtgctttctgggaagaaccccgtcagcgcc
ctgatggaatacgcacagaagtcggggagcgtctgcgagttccagctgctctctcaggac
ggccctccccacgatcccaagttcaagtactgcgtgaaagtgggcgaacgcgtcttccct
gccgtggtatcgaacagcaagaagggagcgaagcagatggccgccgaggccgccatgagg
ggtctcactggggacaccagcaccttacctgaacagacagaggcccagggcgaccagcct
gcggatgtgcctggtgtccagcctgcaactgtggaagaggcaaaagccgcgagcgctaag
ggtgtcggcgagctgattaagtacctgaactccaacccggtcagtggcctcctggagtac
gcccgggccaatggctttgctgctgagtttaagctgatcaatcagactgggccaccccac
gaccccaaattcgtcttccaagccaaagtgggcggccgctggttcccggccgtcacggcg
cacagcaagaagcaaggcaagcaggaggctgccgacgcagcgctccgggttctgatcggg
gagacggagaaggcggagaactccgaagggctgaccatcacagagctccccgtgagcgga
agcacactccacgaccagattgctatgctgagccaccagcggttcaacaccctgaccgca
cgtatccagcacagcttgctcgggcgcaagatcctggccgccatcatcatgaggcgaggg
caagagggcctgggggtcgtggtgagcatcggaacagggaatcgctgtgtgaaaggggag
gagttgagcctgaaaggggagacggtcaatgactgtcatgcggagatcatttccaggaga
ggtttcataaggttcctctacacagagctcatgaagtttgacccctcggcacccgaagac
agcatcttccagcccctggaggatggcaagctgaagatcaaagacgacatcacttttcac
ctgtacatcagcacggcaccttgtggggacggggctctctttgacaaatcctgcaccgac
caggccaacacagtcggggaaggccagcaccagccgctcttcgagaatcccaagcagggg
aagctgcgcacaaaagttgaaaacggggaaggcactatcccggtggaatccagcgacatc
gtgccaacgtgggacggaatccagcacggcgagcgtctgcgcaccatgtcctgcagcgac
aaaatcctgcgctggaatgtgttgggcctgcagggggcgctgctctcccacttcctgcag
cctgtgtatctccgctcagtcacgcttggctacttgtacagtcaaggtcacttgacgcgt
gccatctgctgccgcatgtcaagagacggcaacacattccagtccggactccccgagccg
tactttgtcaatcacccggaggttggcagagtcagcgtctacgactctgcaaggcagacg
gggaagacaaaggaatccagcgtcaactggtgcctccctgatgactctgaagtcgaagtc
ctggatggcacaaaaggcaaagtagatggaccaaaactggacgtgtcccgggtctccaag
aggaacctgtttgcactcttccaatcgctctgtgccaagatggatcgcaaggccctgcag
aaactgaccgtgtactcggaggccaaggaagcggccgtcacataccagagtgccaagcgg
caattcttctgggccctgcaggagatgggctacgggagctggatctgcaaaccccaagag
gagaagacctttggcccgtccgaagtctag
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