Pedobacter riviphilus: H9N25_05340
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Entry
H9N25_05340 CDS
T08657
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
prk
Pedobacter riviphilus
Pathway
prk01501
beta-Lactam resistance
prk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H9N25_05340
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9N25_05340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prk02000
]
H9N25_05340
01504 Antimicrobial resistance genes [BR:
prk01504
]
H9N25_05340
Transporters [BR:
prk02000
]
Other transporters
Pores ion channels [TC:
1
]
H9N25_05340
Antimicrobial resistance genes [BR:
prk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H9N25_05340
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
H9N25_05340
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
H9N25_05340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6537
Motif
Other DBs
NCBI-ProteinID:
QNR85874
LinkDB
All DBs
Position
1277035..1278441
Genome browser
AA seq
468 aa
AA seq
DB search
MKRFNIITILLLALIWSGCSVSKDTALPNIAPGLFRNSSPQDSSSIGTMPLKSFINDLTV
QNLIDTALVKNYDMQIALKNIDAAEVLFKQSKLGYLPELKLQVSANSSRPSDNSLNGLSL
NQFTGSTHIEDYNANLGLVWEADIWGKIRNQKAGALASFLQTEEARKAVQTRLVANVAQG
YYNLLMLDAQLEIAKKNLKLNDSTLRIINLQFDAGQVTSLAIQQAQAQQLVAAQLIPRLE
QGVTLQENALSVLIGTLPKAINRESRLDKMNIPQNLNAGFPSSMLSRRPDIKSAELALTI
ANAKVGVAKASLYPSLVITASGGINSFKASNWFNVPASLFGLVGAGITQPIFQRGQLKSN
LELAKIDREKSVIQFRQSVLNAVGEVSDELTKVEKLKTQYSIAEKRTQTLQQASRNANLL
FKSGMANYLEVITAQGNLLQSELELTTIKTEQLNAVVGLYRSLGGGWN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggtttaatatcattaccatcctgctccttgctttaatctggagcggatgttcg
gtttcgaaagatacagccttacccaatattgcgccaggcttatttagaaacagttcacca
caagactcttcgagcataggcacaatgcccttaaagagttttatcaacgacctcactgtt
caaaatttaattgatacagctttggttaaaaattacgatatgcagattgcattgaaaaat
atcgatgcagccgaagtattgtttaaacaatcgaaactgggttatctgcctgaactgaaa
ctgcaggtgtcggcaaattcaagccgtccgagcgataacagtttaaacggattaagtctg
aaccagtttacaggctcaacacacattgaagattacaatgcaaacctgggtttggtttgg
gaggccgatatctggggcaaaatccgcaaccaaaaggctggcgctttagccagttttttg
cagacagaagaggcacgtaaagccgttcaaacgcgtttggtggccaatgttgcacaaggt
tattacaatttgttaatgcttgatgcacaattggaaattgccaaaaagaacttaaagctg
aacgatagcacgctgaggattatcaatttacagtttgatgccggacaggtaacttcgctg
gccatacagcaagcccaggcacaacagctggttgccgcgcagctaattccccgtttagag
cagggtgtaaccttacaggagaatgctttaagcgtactgattggtactttgcctaaagcc
attaaccgcgagagccgtttagataaaatgaatatcccacagaacctgaatgcaggtttt
ccttcgtcgatgttaagccgcaggcctgatattaaaagtgccgaactggctttaaccatt
gccaatgcaaaggttggtgtagcgaaagccagtttatatccatcgttggtgattaccgca
agcggaggcatcaactcttttaaagcaagcaactggtttaatgtgccggcatctttattc
ggattggttggggcagggattacacagccgatttttcagagaggacagctgaaaagcaat
ttagagctggctaaaatcgaccgtgagaaatcggtgatccagttccgtcagtcggtattg
aatgctgttggcgaagtgtctgacgagttaacgaaagtagagaagttaaaaacgcaatac
agcatagctgaaaaaaggacacaaactttgcaacaggcctcgcgcaatgccaatttgttg
tttaaaagcggtatggccaactacctggaggtaattacggcgcaaggcaatttattgcag
agcgaactggagttaaccaccattaaaacagagcagttaaatgctgttgttggtttgtac
cgctcgttagggggtgggtggaattaa
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