Pedobacter riviphilus: H9N25_20315
Help
Entry
H9N25_20315 CDS
T08657
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
prk
Pedobacter riviphilus
Pathway
prk01501
beta-Lactam resistance
prk01503
Cationic antimicrobial peptide (CAMP) resistance
prk02020
Two-component system
prk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
H9N25_20315
09132 Signal transduction
02020 Two-component system
H9N25_20315
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9N25_20315
01503 Cationic antimicrobial peptide (CAMP) resistance
H9N25_20315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prk02000
]
H9N25_20315
02044 Secretion system [BR:
prk02044
]
H9N25_20315
01504 Antimicrobial resistance genes [BR:
prk01504
]
H9N25_20315
Transporters [BR:
prk02000
]
Other transporters
Pores ion channels [TC:
1
]
H9N25_20315
Secretion system [BR:
prk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
H9N25_20315
RTX toxin transporter
H9N25_20315
Multiple protein transporter
H9N25_20315
RaxAB-RaxC type I secretion system protein
H9N25_20315
Antimicrobial resistance genes [BR:
prk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
H9N25_20315
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
H9N25_20315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QNR84226
LinkDB
All DBs
Position
4949574..4950893
Genome browser
AA seq
439 aa
AA seq
DB search
MIPKSIRLMLVASLIPAALFAQSSKELNINQAIELGIANSKNLKLSQNKIDQAAAQLAVV
KDNALPTASASFMYNHAEIPTTTFALPGSESSFHLPKRADAFVGTAAVQELVYGGGKLKY
AKESTKLLAEVAHLDADKNKEEITYAVINTYYALYKVLQSRKVVDQNLESIAAQIKQAQR
FFEQGIVTKNDVLRFQLQQANVTLTQMDIESNRKVINYNLDILLGLPEDTEVKIVDPTIG
LKTPGSLNEYIGLAMANRQELKQLDVQNKVADFNIKTIKANTLPTVGVGANLYYINPSGN
FIPPTNQYLMPITLGATVSWNFGNLWTNKNKVSEAKIQQSAIIIQKDILSDQVKTDINKN
FQGYQVAMNKIQVLETSIAQATENDKLLASKYKNNVASVTDRIDAETLLYQAKINLEIAK
ADAGLAYYTLLKSTGKITQ
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgatacccaaatcgattagattaatgctagtggcatcattaattcctgcagctttattt
gcgcagagcagtaaggaattaaatattaaccaggcaatagaacttggcatagccaatagt
aaaaacttaaaactttctcaaaacaaaattgatcaggctgctgcacagctcgcagttgta
aaagacaatgcattgccaaccgcaagtgcaagttttatgtacaaccatgctgaaatacca
accactacctttgctttgccgggtagtgagtcatcttttcacctgcctaaaagagccgat
gcttttgtaggtacagcagcggtacaagaacttgtttacggaggcggtaaattaaaatat
gcaaaagaatctaccaaattattggccgaggttgcacatttagatgccgataaaaacaaa
gaagaaattacgtatgcagtaatcaatacctattatgctttatacaaggttttacagagc
agaaaagtggttgatcagaatttagaatcgatcgctgctcagattaaacaggcacaacgt
ttcttcgaacagggtattgtaaccaaaaacgatgtactgcgtttccagttgcagcaggca
aatgttacgctaacgcaaatggatattgaaagtaaccgcaaagtgatcaactataattta
gatattcttttgggtttaccggaagataccgaagttaaaattgttgatccaaccattggc
ttaaaaacaccaggttcgttaaacgaatatattgggctggcaatggccaaccgccaggaa
ttaaaacaacttgatgtgcagaacaaagttgccgattttaacattaaaaccatcaaagca
aatacgttgcctaccgttggtgttggtgcaaacttatattacattaacccaagtggcaat
tttattccgccaacaaatcaatatttaatgcctattacattaggggcaacagtttcctgg
aatttcggcaacctttggacaaacaagaacaaggtaagcgaagcgaaaattcagcaaagt
gcaattatcattcagaaagatatattatctgatcaggtaaaaacagatataaacaaaaac
tttcaaggttatcaagtggccatgaacaagattcaggttttggaaacttcaattgcacaa
gctactgaaaatgataaattgttggcatctaaatacaaaaacaatgtggcttctgttacc
gatcgtattgatgcagaaactttattgtaccaggcaaaaataaacttagagatagctaag
gcagacgcaggtttggcttactatacactattaaaatcaacaggaaaaataacgcaataa
DBGET
integrated database retrieval system
