Pedobacter riviphilus: H9N25_23065
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Entry
H9N25_23065 CDS
T08657
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
prk
Pedobacter riviphilus
Pathway
prk01501
beta-Lactam resistance
prk01503
Cationic antimicrobial peptide (CAMP) resistance
prk02020
Two-component system
prk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
H9N25_23065
09132 Signal transduction
02020 Two-component system
H9N25_23065
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9N25_23065
01503 Cationic antimicrobial peptide (CAMP) resistance
H9N25_23065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prk02000
]
H9N25_23065
02044 Secretion system [BR:
prk02044
]
H9N25_23065
01504 Antimicrobial resistance genes [BR:
prk01504
]
H9N25_23065
Transporters [BR:
prk02000
]
Other transporters
Pores ion channels [TC:
1
]
H9N25_23065
Secretion system [BR:
prk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
H9N25_23065
RTX toxin transporter
H9N25_23065
Multiple protein transporter
H9N25_23065
RaxAB-RaxC type I secretion system protein
H9N25_23065
Antimicrobial resistance genes [BR:
prk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
H9N25_23065
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
H9N25_23065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DNA_pol3_alpha
APG6_N
Motif
Other DBs
NCBI-ProteinID:
QNR84735
LinkDB
All DBs
Position
complement(5556235..5557575)
Genome browser
AA seq
446 aa
AA seq
DB search
MLRVKTVKLMLILLIGTVLPQLAVAQQQVTLKDALTFALQNNTKVRNSKLDIEGGRYKVE
EVRAQALPQLTGNVGLTYNPIIGQLVANFGGQTQAIKLGQNWNSTAGVQLSQQLFNQQVF
TGLQAARSSEEYYSLTSKLTEEQIIELVANNYYQVLVNRQQLNVIDTNIKNVKVVEKIVG
NQYKNGLARKIDVDRISVNLTNLNTQREQVINAITQLENQLKFSMGMPVSTPISLPATEL
TEVTTLPVFTDSIDLANRTEVKLLDNQDKLLSLQRKAYVAEYYPSLALTGNYTYSSQSDG
FDFLKSNAAAIGYGASAIGLTLKVPIFNGFLTRSKIRQADVDIRKAKENRKESVNSLNLA
YENAKIQLRNNINTIKSQRKNADLAQEIYKSTQNNYNNGLASLTDLLDTENALTSAQNSY
TQALLNYKIAEIQLIKSNGNIKSLVQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcttagagtaaaaacggtaaaattaatgctcatactgctaatcggtacggttttaccg
cagctggcagttgctcagcagcaagttaccttaaaagatgcgctaacctttgcgctccaa
aacaacaccaaagtccgaaactcgaaactggatatcgaaggcggaagatataaggtagaa
gaagtaagggcccaggccttacctcagcttactggaaacgtaggcttaacttataaccct
attatcggccagttggttgcaaatttcggtggacaaacacaggcgattaagctgggccag
aactggaattcgaccgcaggtgttcaactttcacaacagttatttaaccaacaggttttt
accggtttacaggctgcgagatcaagcgaggaatattacagccttacttcaaaattaaca
gaagagcagataatcgagctggtggccaacaattactaccaggttttggtaaacagacaa
cagttaaatgttatcgacaccaacattaaaaatgtaaaggtggtggaaaaaattgtgggt
aaccaatataaaaatggtttggcaagaaaaattgatgtcgaccgtattagtgtgaaccta
accaacctgaacacgcagcgcgagcaggtaatcaatgcgattacccaactagaaaatcaa
ttgaaattttcgatgggcatgccggtttctacaccgatcagtttacctgctaccgaatta
acagaagtgactactttacctgtatttacagattctatagatctggccaacagaacagag
gttaaacttttagataaccaggataaacttttatcactacaaagaaaagcttatgttgcg
gaatattacccatcactggctttaacgggtaattatacctactcgagccaaagcgatggt
ttcgatttcttaaaatcgaatgctgctgcgatcggatatggcgcatcggcaattggctta
actttaaaagtgccgatttttaacggttttctaacgcgttcaaaaatccgccaggcagat
gtagatattagaaaagcgaaagaaaacagaaaagaatctgtaaactctttaaatctggct
tatgagaacgcgaagatccaattgcgcaataacatcaacaccattaaatcgcaacgtaaa
aatgccgatttagcgcaagaaatctacaaaagcacccaaaacaactataacaacggtttg
gcttctttaaccgatcttctggatacagaaaatgcacttacatcggcacagaacagctac
acacaggctttattgaattacaaaatagccgaaatacaattaatcaaatcaaacggaaat
attaaatcgctagtacaatag
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