Prodigiosinella aquatilis: PCO85_20040
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Entry
PCO85_20040 CDS
T09220
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
prod
Prodigiosinella aquatilis
Pathway
prod01501
beta-Lactam resistance
prod01503
Cationic antimicrobial peptide (CAMP) resistance
prod02020
Two-component system
prod03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PCO85_20040
09132 Signal transduction
02020 Two-component system
PCO85_20040
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PCO85_20040
01503 Cationic antimicrobial peptide (CAMP) resistance
PCO85_20040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prod02000
]
PCO85_20040
02044 Secretion system [BR:
prod02044
]
PCO85_20040
01504 Antimicrobial resistance genes [BR:
prod01504
]
PCO85_20040
Transporters [BR:
prod02000
]
Other transporters
Pores ion channels [TC:
1
]
PCO85_20040
Secretion system [BR:
prod02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PCO85_20040
RTX toxin transporter
PCO85_20040
Multiple protein transporter
PCO85_20040
RaxAB-RaxC type I secretion system protein
PCO85_20040
Antimicrobial resistance genes [BR:
prod01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
PCO85_20040
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
PCO85_20040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WJV53422
LinkDB
All DBs
Position
4306238..4307722
Genome browser
AA seq
494 aa
AA seq
DB search
MCNVPILIALTLMAPIAVQAGTDEPLRPAQATRQGQPPPSAVSISLNAQTIGLTLSDAIY
LGLRDNRSIRSAYLDRIAQKFDLRVAEDRFTPKLMLSGSYLSNRNQDDRYRQSSVTPATT
LLTPYGTRVSLGWTYRHTQADQAGLSLNDGANISLIQPLLRGAGKEIATAPVRLARLTEQ
TNRLNLKSTVSQTITQVIESYRTLLQVQEQLKISRDSLERARQLIEVNRAMIATGRMAEF
EIVQTEAEVASQELAYEEARNQVDTARLALLQLLALNLNTPIVATEALQARRVDVDAAQA
LHQAEASQPAWLSQVIYSEQEAINLAVARNDRLWDVSIVGGASQIRDRNTLSGSARTWEN
YVGIQVEIPIGDLSTRQAEVQARVNVRNQEIKLAEAHQQLERDVTNAVRDIGTRWRQYEI
AQRARNLTRRKLEIEREKLTVGRSSNFQVLSFENDLRNAENARLNALISYLNAQAELDQT
LGTTLKSWDIALND
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaatgtgcctatcctcatcgcactcacgctgatggcccctattgctgtccaagcg
ggaactgatgagccattgcgcccggcccaggcaacccgccagggccagccgccaccctct
gctgtcagtatttcactcaatgcccagaccatcgggctgacactgagcgatgcgatctat
ctagggctgcgcgacaaccgttctatccgcagcgcctatctggatcgcatagcccagaag
ttcgatctgcgcgtggccgaagaccgcttcacgccgaagctgatgctcagtggcagctac
ctttccaatcggaatcaggatgaccgttatcgacagagctccgtaacacctgcaaccacc
ttgctgacgccgtatggcacccgcgtgagcctgggatggacgtatcgtcatacacaggcc
gatcaggccggactatcactcaatgacggtgccaatatatcgctgatccagccgttgcta
cgcggtgcgggcaaggaaattgcgacagcgccggtgcgccttgcgcggctaaccgagcag
accaaccgactcaacctgaaatccactgtctcgcagaccatcacacaggtgatcgagtcc
tatcgcacgctattgcaggtacaggagcaattgaagatctctcgggactcgctggagcgc
gcccgtcaactgatcgaggtcaaccgagccatgatcgcaaccgggcgcatggccgagttc
gagattgtgcagacagaagccgaagtcgcctcgcaagagctggcctacgaagaggcccgc
aatcaggtggacacggcacggcttgccctgttgcagctactagccttgaatctgaacaca
cctattgttgcaaccgaggcgctacaggcccgacgtgtggatgtcgatgcagcccaggca
ctacaccaagccgaagcatcacagccagcctggctctctcaggttatctatagcgagcag
gaggccatcaatctcgcggtggcgcgtaacgaccgtctctgggatgtttcgattgtgggc
ggtgccagccagatacgtgaccgcaatactctgagcggctccgcacgcacctgggaaaac
tatgtcgggatacaggtcgaaattcccattggcgacctcagcacacgccaggcagaagta
caggcccgggtcaatgtgcgcaaccaggagattaagttggcggaagcccaccagcaactg
gagcgcgatgtcacgaatgcagtacgcgatattggcacccgctggcggcagtacgaaatc
gcccagcgcgcgcgcaacctcacccgccgcaagctggaaattgaacgggaaaaacttaca
gtgggtcgatccagcaacttccaggtgctgagtttcgagaacgatttgcgtaatgccgag
aatgcgcgcctcaacgcattgatcagctacctgaacgcacaagccgaactggatcagacg
ctgggcaccacattgaaaagctgggatatagcgcttaatgactag
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