Pedobacter roseus: H9L23_05725
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Entry
H9L23_05725 CDS
T06980
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
proe
Pedobacter roseus
Pathway
proe01501
beta-Lactam resistance
proe01503
Cationic antimicrobial peptide (CAMP) resistance
proe02020
Two-component system
proe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
H9L23_05725
09132 Signal transduction
02020 Two-component system
H9L23_05725
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9L23_05725
01503 Cationic antimicrobial peptide (CAMP) resistance
H9L23_05725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
proe02000
]
H9L23_05725
02044 Secretion system [BR:
proe02044
]
H9L23_05725
01504 Antimicrobial resistance genes [BR:
proe01504
]
H9L23_05725
Transporters [BR:
proe02000
]
Other transporters
Pores ion channels [TC:
1
]
H9L23_05725
Secretion system [BR:
proe02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
H9L23_05725
RTX toxin transporter
H9L23_05725
Multiple protein transporter
H9L23_05725
RaxAB-RaxC type I secretion system protein
H9L23_05725
Antimicrobial resistance genes [BR:
proe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
H9L23_05725
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
H9L23_05725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5320
Motif
Other DBs
NCBI-ProteinID:
QNN43597
UniProt:
A0A7G9QJS2
LinkDB
All DBs
Position
complement(1264151..1265542)
Genome browser
AA seq
463 aa
AA seq
DB search
MPRISLFYSSLLLSISLSIGTSAQTLSLKQAVNTALTNYGTIKAKNNYADASKSYIQQAK
REYLPNFSLSAQQDYGTINGQNGPQYGLGGLGTASSGPALDKQNWNAAFGGLYLANVNWD
FFTFGRIRDRIKVANAAYQRDKNDLEQEKFQQEIRVSGAYLNLLAAQRLTRSQQKNLDRA
ITFQNTAIIRAKNGLIAGVDSSFAKAEVSNAKIALTKAKDLEQEQANRLGVLMGLTATSY
DLDTASITRIPGNLLEDTVVKSSHPLLKFYQNRVDVSDHQVNYFKKLYYPTFTFFGVMQG
RGSGFSSGYALDQSAYSTSYADGINPTRGNYLIGIGMTWNLSTLLKNRPQVRAQEYISQG
LKEEYNLVDQQLKAQLALAESKLNNALANYREAPIQVKAASDAYLQKNTLYKNGLTTLVD
LTQALFTLNRAETDRDIAFTNVWQALLLKSAALGNYDIFINEF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtatatctttattttattcttcactattattatctattagtttatctattggt
acaagtgctcaaacgctaagtctaaaacaggctgttaatactgcattaaccaattatggc
accataaaggccaaaaacaactatgcagatgcttcaaaatcttacattcagcaggcgaaa
agggagtatttgccaaacttcagtttaagtgcccaacaggattatggaaccatcaacggc
caaaacggcccgcagtatggtttaggcggtttgggaacagcttcttctggtccggcctta
gataagcaaaactggaacgctgcatttggcggattgtatttagccaatgtaaactgggat
ttcttcacgtttggaagaatcagagaccggataaaagtggccaatgcggcttaccaaagg
gataaaaacgatttggagcaggaaaaattccaacaggaaatccgcgtttcaggtgcatat
ttaaacttattggctgcacagcgcttaaccaggtcgcaacagaaaaatctcgatcgcgcc
attacctttcaaaatacagccattatcagggctaaaaacggattaattgcaggggtagat
tcttcctttgcaaaagcagaagtttcgaatgccaaaattgccttaacaaaagcaaaagac
ctggagcaggaacaagccaaccgtttaggcgttttaatgggtttaacggctacttcatac
gatttggataccgcttccattacgcgtataccgggtaatctgctcgaggataccgtggtt
aaaagttcacatccccttttaaaattttaccaaaaccgggtggatgtaagcgatcatcag
gttaattatttcaaaaaactttattacccaacctttactttctttggtgtaatgcaggga
cggggatctggatttagctcaggttatgccttagatcaaagtgcttattctaccagttat
gcagatggtatcaatcccacgcgtggaaactatttgattggcataggaatgacctggaat
ttatccaccttattaaaaaaccgtccgcaagtacgtgcacaagaatacattagccagggt
ttaaaagaagaatataaccttgttgatcaacagttaaaagcacagttggcccttgcagaa
tccaaattgaacaatgcattggcgaactatagagaggcacccatccaggtaaaagcagcc
tcagatgcctatttacagaaaaacaccctgtacaaaaatggtttaaccacgctggttgat
cttacccaggcacttttcaccttaaacagggccgaaacggatcgggatattgcctttacc
aatgtatggcaggcgctgctgttaaaatcggctgctttgggcaattacgacatatttatc
aacgaattttaa
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