Pedobacter roseus: H9L23_09125
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Entry
H9L23_09125 CDS
T06980
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
proe
Pedobacter roseus
Pathway
proe01501
beta-Lactam resistance
proe01503
Cationic antimicrobial peptide (CAMP) resistance
proe02020
Two-component system
proe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
H9L23_09125
09132 Signal transduction
02020 Two-component system
H9L23_09125
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9L23_09125
01503 Cationic antimicrobial peptide (CAMP) resistance
H9L23_09125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
proe02000
]
H9L23_09125
02044 Secretion system [BR:
proe02044
]
H9L23_09125
01504 Antimicrobial resistance genes [BR:
proe01504
]
H9L23_09125
Transporters [BR:
proe02000
]
Other transporters
Pores ion channels [TC:
1
]
H9L23_09125
Secretion system [BR:
proe02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
H9L23_09125
RTX toxin transporter
H9L23_09125
Multiple protein transporter
H9L23_09125
RaxAB-RaxC type I secretion system protein
H9L23_09125
Antimicrobial resistance genes [BR:
proe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
H9L23_09125
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
H9L23_09125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6686
Motif
Other DBs
NCBI-ProteinID:
QNN44214
UniProt:
A0A7G9QLI9
LinkDB
All DBs
Position
complement(2197351..2198646)
Genome browser
AA seq
431 aa
AA seq
DB search
MSRYIKYIVVLILLGAGFKTKAQDIPQIWDLKTAIGYAKEKNISINTLKLSSQTAEQNLI
ASKAAVLPNLSGNVSQAITNYKSGLQNTSGFGLSSDMTLYNGSYLKNDIKSKELSLQTAN
LSVEAAKNDITISITQAYLNILLARENITYLKDLLTTSEAQVKQSEQQFKFGTIAKKDLL
QLQATYANDKYTLVTAQNTLQQNILTLKQLLQIPTATPFEVSTTDTVAVAPALNNLASAQ
DQALRTRPEIKSGELNIQLQTTELAKAKSTLRPTLSLGGSLNTGYNNNNIGGYGYQLNNS
FYQNLGLTLSIPIFDRKVTKTNVAKANIGIEQARLSLLDAKTTLTQNVERAYINVQNANS
QYAAAQEQFNYTGEALRISNAALKEGTNNIVENLQQKNLYVQALQAFVQAKYTASLYTKI
YNFYTGVPITN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagcagatacattaaatatattgtcgtactcattttgcttggtgcgggcttcaaaacc
aaagctcaggatatcccacaaatttgggatctgaaaacggctatcgggtacgccaaagaa
aaaaacatcagcatcaataccttaaagctgagttctcaaacggctgagcaaaacttaatt
gcttcaaaagccgctgtactcccaaatttatcgggaaatgtttcacaagccatcaccaat
tataaatccggtttgcaaaataccagtggttttggcttaagttctgatatgacgctttac
aatggaagttatttaaaaaatgacatcaagtctaaagaacttagcctgcaaactgcaaat
ctatcggtagaagcagctaaaaacgatattaccatctccatcacccaggcttatctgaat
attctgttagccagagaaaatatcacctatttaaaagatcttctaaccaccagcgaagcc
caggttaaacaatcagaacagcaatttaaatttggaaccattgccaaaaaagatctgttg
cagttgcaggctacttatgccaatgataaatatactttggttacagcgcagaatacttta
cagcagaatattttaaccttaaaacaactgttacaaattcctacagctacgccttttgaa
gtaagtacaactgataccgttgcagtagcccctgcattgaataatttggcttcagcacaa
gatcaggcattacgcacccgtccggaaattaaaagcggtgaattgaatatccagcttcaa
accactgaactggcaaaggccaaatcaaccttacgccctacactgagtttaggcggatcg
ctaaatacgggctataacaataataatattggaggttatggataccagttaaataatagt
ttttatcaaaacttagggttgacactttccattccgatttttgatagaaaagtcaccaaa
acaaatgttgctaaggcaaacattggtattgagcaggcccgtttatcacttttagatgcc
aaaacaacattgacacaaaatgtagaacgtgcatacatcaacgtacaaaatgcaaacagc
cagtatgccgctgcacaagagcagtttaactatactggcgaggctttgcgcatttcgaat
gcggctttaaaagaaggtaccaacaacattgtagaaaacctgcaacagaaaaacttatat
gtgcaggcattacaggcatttgttcaggcaaaatatacagcaagcctctacactaaaatc
tataatttttatacaggagttcctattactaactaa
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