Pendulispora rubella: LVJ94_25010
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Entry
LVJ94_25010 CDS
T10973
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
prue Pendulispora rubella
Pathway
prue01501
beta-Lactam resistance
prue01503
Cationic antimicrobial peptide (CAMP) resistance
prue02020
Two-component system
prue03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
prue00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LVJ94_25010
09132 Signal transduction
02020 Two-component system
LVJ94_25010
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LVJ94_25010
01503 Cationic antimicrobial peptide (CAMP) resistance
LVJ94_25010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prue02000
]
LVJ94_25010
02044 Secretion system [BR:
prue02044
]
LVJ94_25010
01504 Antimicrobial resistance genes [BR:
prue01504
]
LVJ94_25010
Transporters [BR:
prue02000
]
Other transporters
Pores ion channels [TC:
1
]
LVJ94_25010
Secretion system [BR:
prue02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LVJ94_25010
RTX toxin transporter
LVJ94_25010
Multiple protein transporter
LVJ94_25010
RaxAB-RaxC type I secretion system protein
LVJ94_25010
Antimicrobial resistance genes [BR:
prue01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LVJ94_25010
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LVJ94_25010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WXB10475
LinkDB
All DBs
Position
complement(6527286..6528791)
Genome browser
AA seq
501 aa
AA seq
DB search
MSRFRFLLRFLFAGALVSLSARDARAEREGGQIVSEAGVVQSALAHNPGLAAARTELRRA
ALLEEGEGHRYGFVLGLDGQADRTKTPSLSVSGVTTPESTTYKLGAQISRHFLWGTDLTL
RLEGQSQRMQSTFVNTTANPPQLATFTFGPAYGALAKLSLKQPLLRGAGRDVFEAELVQA
RASRAKAASASEQTASELMRDVLKGYWELFYASRAVEIRERSLGRGRAELADAAARIRTG
SAAPADALTIETDVAKREEDVTGALREERKSSNELARLVGDASLGARRADVTRAPPAPVP
PPPDARERALAVSYELAGQRAEVNLAEVRARTAADELRPKLDLDAYVQAQGLGNREIPPA
LQQVYGLEAWSAHVGLTFEAPLDGTRRRAEKTRADLAISSAQQKLEETKQRILKELENAV
ADSASAQRRLELAGATFSIAEQQLTAKEQLFRTGGATALELVKAEDDVRDAELRRTRAHV
DWVQADVTIAHLTGRLLTRSE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagtagattccggttcttacttcggtttctctttgcgggggcgctcgtgtcactttcg
gcacgagatgcacgggccgagcgcgagggagggcaaatcgtcagtgaggcgggcgtggtg
caaagtgcactggcgcacaatccaggcctcgcggccgcgaggacggagctgcgccgcgcg
gcgttgctcgaggaaggcgaggggcatcgctacggattcgtcttggggctcgatggtcag
gcggatcgcacgaagacgccctctctcagcgtctccggggtgacgacgccggagtcgacg
acgtacaagcttggcgcgcagatctcgcggcacttcctttggggaacggatctgaccttg
cggctcgaaggccagagccagcgtatgcagtcgaccttcgtgaatacgactgcgaacccg
ccgcagctcgcgaccttcacctttggcccggcctacggcgcgctggccaagctgtcgctg
aagcagccgctcttgcgcggcgcagggcgcgacgtcttcgaggccgagctggtgcaagcg
agggcctcacgcgcgaaggccgcgagtgcctcggagcaaacggcgagcgagttgatgcgt
gacgtgctcaaaggctactgggagctcttttacgcgagccgtgcggtggaaattcgggag
cgcagtctgggacgaggccgcgcggagctcgccgatgccgccgcacgcatccgcacgggc
agcgccgcccctgccgatgcactcaccatcgaaaccgatgtggcgaaacgcgaggaggac
gtgacgggggcgttgcgcgaggagcgtaagagctcgaacgagcttgctcgcctggtgggc
gacgcgtcgttgggggcacgccgcgccgatgtgacccgcgctccgcctgcgccggtgccg
cctccgccggacgcgcgcgagcgtgcactcgcggtgtcgtacgaattggccgggcagcgc
gcggaggtgaatcttgcggaggttcgggcacgcacggcggccgacgagcttcgcccgaag
ctcgatctcgatgcgtacgtccaggcgcaaggcctgggaaaccgcgagataccgcccgcg
ctgcagcaggtttacggcctcgaggcgtggagcgcgcacgtggggctgaccttcgaggcc
ccgctcgacggtacgcgccgccgtgcggagaaaacacgcgcggacctggcgatatcctcg
gcgcagcaaaagctcgaagagacgaaacagcgcatcttgaaggagctggaaaacgccgtc
gccgatagtgcgtccgcccagcgccgtctggagctcgccggtgcgacgttctccatcgcc
gagcaacagctcaccgccaaagagcaactctttcgcaccggcggtgccacggcgctggag
ctcgtgaaggcggaagacgacgtgcgtgacgccgaactccgccgcacgcgcgcccacgtc
gattgggtccaagcggacgtcaccatcgcgcacctcaccggccgtctcctcacgcgcagc
gaatag
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